Ictalurus punctatus (channel catfish): 100528210
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Entry
100528210 CDS
T04658
Symbol
vta1
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100528210 (vta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
100528210 (vta1)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100528210 (vta1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
DAG_kinase_N
Motif
Other DBs
NCBI-GeneID:
100528210
NCBI-ProteinID:
NP_001187409
Ensembl:
ENSIPUG00000004750
UniProt:
E3TE70
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All DBs
Position
2:8792124..8814207
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AA seq
306 aa
AA seq
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MAVPPQLKSIQHHYRTALEHDKRDPVVAYYCRLYAMQTGVKLDSKTPECRKFLVKLMDQL
EMMKQELSTNESIPQEVVGNAHIENYALKMFLYADNEDRSGRFHKNMIKSFYTSSLLFDV
LSVFGELSEENIEHRKYARWKAAYIHNCLKSGETPQAGPIGMEGEAYDDEFGTEAGSPSY
ASFGAPQPQPSSSADLADQGPASIPPPNYSTIQVPPGSHAPANTPADLPHPAAEPMKPVP
VPRAVPVTDPLPLNVIQQGDVRLTPEDFTRAQKYCKYAGSALQYEDVATALQNLQKAVKL
LTTGKE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcccaccgcaattaaaatccatccagcatcattacagaacagcgctggaacat
gataaaagagacccggtggtagcgtattactgtcgtctttatgccatgcagacaggggtg
aaactggacagtaagactccagaatgccgtaagttcctggtgaagctgatggatcagctg
gagatgatgaagcaagagctcagcaccaatgaatccatcccccaagaggttgtgggcaac
gcccatatcgagaactatgccctaaaaatgttcctctacgccgacaacgaggatcgatca
ggtcgcttccacaagaatatgatcaagtctttctacacctcaagcctcctgttcgatgtg
ctgtctgtgtttggcgagttgtcagaggagaacattgagcacaggaagtatgctagatgg
aaggcggcctacattcacaactgcctaaagagcggtgagactcctcaagcagggcctatt
ggcatggaaggggaagcgtatgatgatgagttcggcactgaagctggtagtccatcctat
gcgtcttttggtgcacctcagccgcaaccctcctccagtgcagatttggcagaccaagga
ccagcatctatccctccacccaactatagcactatccaggttcctcctggctctcacgct
ccagccaacacgcctgcagatcttcctcatccagcagccgagcccatgaaaccagttccg
gttccccgggctgtgccggtcactgaccccttgcccctcaacgtaatccagcaaggtgat
gtgcgtctcacaccagaggacttcacccgagctcagaagtactgcaagtatgcaggcagc
gcgttacagtatgaagacgtcgccactgctctccagaatctacagaaagccgtcaaactt
ctaaccactggcaaagaatga
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