Ictalurus punctatus (channel catfish): 108255043
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Entry
108255043 CDS
T04658
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108255043 (cxxc1b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108255043 (cxxc1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108255043 (cxxc1b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108255043 (cxxc1b)
COMPASS/SET1 complex (yeast)
108255043 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
Crescentin
PHD_5
Motif
Other DBs
NCBI-GeneID:
108255043
NCBI-ProteinID:
XP_017306161
Ensembl:
ENSIPUG00000015280
UniProt:
A0A2D0PL63
LinkDB
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Position
21:complement(410930..425469)
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AA seq
563 aa
AA seq
DB search
MESEISDMDQVPAVDNSSVEDEKPPLYCICRKPDINCFMIGCDNCNEWFHGHCINMTEKM
AKGIREWYCQQCQEMDPSLELKYRSKKSCEREMEPERVQKRSSVPDFKLDKRRGSKVKRS
ARMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCVVRARKMLRVRDEEFFL
HERTENRMHRDGQYSDDYNEDEMELYSRYKDQNMPWGSDEEGPVYSPAQCKKAIKVKHVK
RREKKLDKKKESRRHKQKQKHKDRIRHSDRSDGRYTGDLHQCLGPSCVEVARPNSKYCSE
DCGMKLATNRIYEILPQRIQQWQQSPCIAEEQGRKQLERIRREQQAARMRLAEMECRFHE
LEGIIAKAKQQVVQQDEEVNETESEDTDLQIFCVSCSHPINPKVAMRHMERCYAKYESQT
SFGSIFPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPLVRNVF
EPTGEYCRMSKRKCNRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLL
ALMLHQTIQHDPLTTDLRSSKDR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgagatttctgatatggaccaagtgccagcagtggacaacagcagtgtggaa
gatgagaaaccacctctgtactgcatctgccggaaaccagacatcaactgtttcatgatt
ggctgtgataactgtaacgagtggttccatggacattgcataaacatgactgagaaaatg
gcaaagggtatcagagagtggtattgccagcagtgtcaggaaatggatccctctcttgaa
ttaaaataccggtcaaaaaaatcatgtgagagagagatggaaccagagagagttcagaaa
cgatccagtgtgccagacttcaaactggataagcgccgtggatctaaagtgaaacgttct
gcacgcatgtgtggtgagtgtgaaccctgcagacgtactgaagactgtgcacagtgtgac
ttctgcaaggacatgaaaaaatttgggggcccaaataaaatccggcaaaaatgtcgactg
cggcagtgtgtagttcgtgcaaggaaaatgctgcgtgttcgagatgaggagtttttcttg
catgagaggacagaaaataggatgcacagagacggacaatattcagatgattataatgaa
gatgagatggagctgtactcacgatacaaggaccagaatatgccttggggcagtgatgaa
gaaggtccagtttacagccctgcccagtgcaagaaagctataaaagtcaagcatgttaag
cgtcgagagaagaaacttgacaaaaagaaggagtcacgcaggcataagcaaaaacagaag
cataaagaccgtatcaggcacagtgacagaagtgatggtcgttacaccggagacttgcac
cagtgcttgggccctagctgtgttgaagtggcacgtcctaactcaaaatattgctcggaa
gactgtggcatgaagctagcaaccaaccggatctacgagattcttccacagcgtatccag
caatggcagcagagtccgtgcatcgctgaggagcagggcaggaagcaactggaacgaatt
cgtagggaacagcaggcagctcgcatgcgccttgctgaaatggagtgccgttttcatgag
ctggaggggatcattgctaaagccaagcagcaagtggttcagcaggatgaggaggtgaat
gaaacagaaagcgaggacacggatctccagatcttttgtgtatcttgcagtcaccccatt
aaccctaaggtggcaatgagacacatggagaggtgttatgctaagtacgaaagccagaca
tcctttggttctatattcccaacacgaatagaaggggcaacaagactcttctgtgatgtg
tataatcctcagagtaaaacctactgcaagaggcttcaggttttgtgtccagaacattcc
agagaccccaaggtgccagtggatgaagtgtgtggatgtcctctagtgcgtaatgtattt
gagccaacaggagagtactgcagaatgtctaagcgcaaatgcaacagacactactgctgg
gagaaactcagacgagcagaagtagacctagagcgtgttcgagtgtggtacaagttggat
gagctatttgaacaggagcgtaacgtaagaacagcgatgactaacagggcagggctgctg
gccctcatgttgcaccaaaccattcagcatgatcctctgaccactgatttacgcagcagc
aaagacagatag
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