Ictalurus punctatus (channel catfish): 108257292
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Entry
108257292 CDS
T04658
Name
(RefSeq) C-type mannose receptor 2 isoform X2
KO
K06560
mannose receptor, C type
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108257292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257292
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ipu04054
]
108257292
04090 CD molecules [BR:
ipu04090
]
108257292
04091 Lectins [BR:
ipu04091
]
108257292
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108257292
Pattern recognition receptors [BR:
ipu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108257292
CD molecules [BR:
ipu04090
]
Proteins
108257292
Lectins [BR:
ipu04091
]
C-Type lectins
Others
108257292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
UL45
ODV-E18
Motif
Other DBs
NCBI-GeneID:
108257292
NCBI-ProteinID:
XP_017310421
Ensembl:
ENSIPUG00000024194
UniProt:
W5UBM1
LinkDB
All DBs
Position
2:complement(31665332..31717140)
Genome browser
AA seq
1474 aa
AA seq
DB search
MRDQEKSKSARGDALHICRCTLYLFLLCLEPNTVLTAHESDSDTFAFFHEGVWGCLAVRD
HALYLTTSCDGNAQLWKWVTRNRLFNIGSSLCLGVRVGNGSASSVLPRLSVYRCDREPPL
VRWSWSCSKFLDDLSTYLPNPTPPRDDRNISVAWPTSAAGNTRWRLYGDEQDLCAKTYRE
IYTIQGNSHGHPCYFPFLYDGQWFHNCTSVGREDGHLWCATTHDYGKDERWGFCPVKSAD
CETFWDTDSLTNNCYQFNFQATLSWEEAHTSCQQQGAELLSITKVEEQSFINGFLTGYSS
TLWMGLNDLDLNGGWQWSDSAPLKYLNWETDQPNHEDDQNCGVIRTESSGRWQNKECSMA
LPYICKKRPNATLDPFTTDSWTDDGRYQCDIGWQNFQAGCYRLSSDKQNWIHAEKNCQKM
DAHLVSIHTLPELEFINMHMKRDVEELWIGLHDTAMQMNFEWTDSTPVIFTFWHPFEPNN
FLNTQEDCVIMWGPEGRWNDSPCNYSLPSICKKAAQKTDGPIQDHGCRQGWKWHSPACFW
VGEESVSFNSARRVCANYNATVAVINNRFEQAFVNSLVFGRSDDHFWLGLHNENTTGPFR
WLTGEQLTYTNWNRDQPAPLKGGCVAMATGHATGLWEVKECVTARSKYICRQDKGSSFSP
SPPIPQPTPPITGSCLPDWKTSSTLHHCYKVFHAGDLEKKLTWIQAHMFCRKHGAELVSF
ANPDEETFMFQVLHEAFGVEEDHEQHWFWIGISRRISDSWTWSDGSAVSYQNFGRGPYSS
ALCGAANVADMNWVKADCNSELDWICKVPKGKAEVEPEPAEDSGLDWVDFQEAQYKLFEH
RSTWGQAQRICSWFGGSLASIHSASEKQFLASTLRKMSRIESDLWWIGLHTFENDGRFRW
SDHSVLNYVSWGLGQPRPLTRDRKCVHISASKGEWADKKCHLDMPYVCKRVNVTGTPPPT
PAPPLIPAGCPDGWSPFLHKCYKVFGKDEAIRVTWSAARMMCQTQGATLATVPSHIEQAF
LVTLLPNSSFHLWLGLTSDSQGHFKWAEPGLLSYTNWGPGEPVNNSGQNKNPTNCVVLLH
VSPHRTTGMWASRGCESEKHGYICMKNKDPAIPPGVDLLPPVAEGQLEFKGKQYRVLQSR
LDWEGALHVCESVNGSLASVQDPQQQAYLTLLLNVLRKPAWIALHSDGGRGYRWLGEEEV
TFSNWRDGEPNLMAGCGHMTISGQWSMSSCNAKLDTTICEMNTERAIDHRWMYPGHCLQS
VGNWSWVPFRNHCYAFNLNQLRLQHEAEHTCKKVGAELLSVQDESENGFVWEHIQSYQEQ
AHGAWLGMTFNPKGGSLQWPDSSVVEYTNWEQQDGNLSMLSANSCFWVQSNTGLWKPGSC
KNRTHGVICKRPRGLEASVVSADVDHLPALVLILLAVLVLIALIVGGVYLYRRRSSGTAG
SYEGARYSRTNLSSFEEAEKNILVSDMELNEQGE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatcaggagaagagcaaaagcgcacgcggggatgcgctccacatttgcagatgc
actttatatttatttctcttatgcctggaaccgaatactgtgctcacagcacatgagtct
gactccgacacgtttgcctttttccacgagggggtgtggggctgtttggccgtacgagac
cacgcgctctacctcacaacatcctgtgatggcaatgctcagctctggaagtgggtcacc
aggaatcgcctctttaacataggctcctccctctgcctgggtgtcagagtgggaaatggg
agtgcctcgagtgtcttgcctcggctcagtgtgtaccggtgtgaccgggaaccccctctg
gtccggtggtcgtggagctgcagcaagttcctggatgacctcagcacctatttacccaat
ccgaccccacccagagatgaccgtaacatctcagttgcttggcctacgtcagccgctggg
aacacacggtggagactttatggtgacgagcaggacctctgcgccaaaacgtaccgcgaa
atctacaccatccagggaaactctcacggacacccgtgttactttcctttcctctatgat
ggccagtggttccacaactgcaccagtgtggggagagaggacggccatctctggtgtgcc
actacacatgactatggcaaagatgaacgctggggattctgccccgttaagagtgcggac
tgtgagacattctgggacacagactctctgacgaataactgctaccagtttaatttccag
gccactctgtcatgggaggaggctcacaccagctgccaacagcagggggcagaactgctg
agcatcaccaaggtggaggagcagagctttatcaacggttttctcactggttacagctcc
actctgtggatgggtctgaatgatctggacctcaacggaggctggcagtggtctgactcc
gctcctctcaaatacctcaactgggagacagaccagccaaaccacgaggatgatcagaac
tgtggcgtgatccgcaccgagagctcagggcgctggcagaacaaagagtgctccatggct
ctgccttacatctgcaagaaacggcccaatgccacccttgaccctttcaccacagactca
tggacagacgatggacggtaccagtgtgatatcggctggcagaacttccaggcaggctgc
tacaggctgagctcagacaagcagaattggattcacgctgagaaaaactgccagaagatg
gatgcccacttagtcagcatccacacactgccagagctggagtttattaatatgcacatg
aaaagagatgtagaagagttgtggatcgggctgcatgataccgccatgcagatgaatttc
gagtggacagacagcacgcctgttatcttcacattctggcacccatttgagcccaacaac
ttcctgaacacgcaggaagactgcgtcatcatgtggggtcctgaaggccgctggaatgat
agcccctgcaattactctttaccctccatctgtaaaaaagcagctcagaagaccgatgga
ccgatccaagaccacgggtgcagacagggatggaaatggcacagtcctgcctgcttctgg
gttggagaggagtctgtatctttcaacagtgctagaagagtgtgtgcgaactacaatgcc
acggtagctgtaatcaacaacaggtttgagcaggcgtttgtgaacagcttggtgtttggc
cgttcagatgaccatttctggctgggactgcataatgagaacaccactggccctttccgc
tggctcactggagagcaactgacctacaccaactggaacagagaccagccagctcctctt
aaaggcggatgtgtagccatggcaacaggccatgctacgggcctgtgggaggtaaaggag
tgtgtaaccgcacgctctaagtacatctgcagacaggacaagggctcttcattttcccca
agcccccctatacctcagcccacaccccccatcacagggtcctgtctcccagattggaag
acctccagcacattgcatcactgctacaaggtctttcatgctggtgacctagagaagaag
ctcacatggatccaagctcatatgttttgtcggaaacacggagctgaactagtcagcttt
gccaacccagatgaggagacctttatgtttcaggtcctccatgaggcctttggagtggag
gaggatcatgagcagcactggttctggattggcatatcacgcagaatcagtgacagctgg
acatggagtgatggatctgctgtctcgtatcagaactttggaaggggtccgtatagctca
gcactgtgtggagcagctaatgtggcagatatgaactgggtaaaggctgactgtaattct
gaactagactggatctgcaaagtaccaaaagggaaagctgaggtagaacctgagcctgct
gaagactctggtctggactgggttgatttccaagaagctcagtataagctgtttgagcat
cgctctacatgggggcaggcccagaggatctgttcctggtttggtggctctctcgcctcc
atacattctgccagtgagaaacagttcctggcaagcactctgcgcaagatgtcgaggatt
gagagtgatctctggtggattggactacacacatttgagaacgatggacgattccggtgg
tctgatcactctgtgctcaactatgtgtcctggggacttggccaacctcgtcccctcaca
agagaccgcaaatgtgtccacatatctgcatctaaaggggaatgggcagataaaaagtgt
catttagatatgccctatgtgtgtaagagagtaaatgtcacaggcacacctcctcccact
ccggctcccccactcatcccagcaggctgtcctgatggctggagtccattcctgcacaag
tgttataaggtatttgggaaagacgaggcgattcgtgtcacatggtctgctgcccggatg
atgtgccaaactcaaggggcaacactggccacagtgccctctcacattgagcaagcattc
ctggtgactctgctgcccaactcgagttttcatctttggttggggcttacttcagattct
cagggacacttcaagtgggcagagcctggtttacttagctatacaaactggggccctggg
gagccagtgaacaacagtgggcaaaacaaaaatccgacgaattgtgtggtgctactacac
gttagtcctcacagaaccacgggaatgtgggcatctcgaggatgtgagtcagagaaacat
ggctacatctgcatgaaaaacaaagaccctgctattccccctggtgtggaccttcttccc
cctgttgctgagggccagctggagtttaagggcaaacagtaccgtgtgttacaatctcgg
ctagactgggagggggccctgcatgtgtgtgagtctgttaatggtagtctggcgtcggta
caagatccacagcagcaagcgtacctcacactcttactcaatgtcctccgcaagcctgcc
tggattgcactacacagtgacgggggccgtggatacagatggctgggcgaggaggaagtt
actttcagcaactggcgcgatggagagcccaatctgatggctgggtgtggtcacatgact
atcagtggccagtggtctatgtcatcctgtaatgccaaattggacacaaccatctgtgaa
atgaatacagagcgagcaatagatcacaggtggatgtatccgggtcactgccttcagtca
gttgggaactggtcctgggttccatttagaaaccactgttatgcgtttaacctgaaccag
ctgcggctacagcacgaggccgagcacacttgcaagaaagtgggagcagagctactctca
gtgcaggatgagagtgagaatggttttgtatgggagcacattcagagctaccaggagcag
gctcatggcgcctggctcggcatgaccttcaatcccaaaggaggcagcctgcagtggccg
gacagttcggtggtggagtacactaactgggagcagcaggacggtaatctgagcatgctt
tctgctaacagctgcttctgggtccagagtaacacagggctctggaaacctggatcctgc
aagaaccgcacacatggggtcatctgtaaacggccacgaggactggaggcatctgttgta
tcagccgatgtagatcatcttcctgctctcgttcttatcctgctggctgtcctggtcctg
attgccctcattgtgggcggagtttatctgtatcggaggaggagctctggcactgccggc
tcctatgagggcgctcgttacagtcgtactaacctcagctcatttgaagaggcagagaaa
aatatcctggtgtcggacatggagctaaacgagcaaggggaataa
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integrated database retrieval system
