Ictalurus punctatus (channel catfish): 108259870
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Entry
108259870 CDS
T04658
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04120
Ubiquitin mediated proteolysis
ipu04137
Mitophagy - animal
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108259870
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108259870
04137 Mitophagy - animal
108259870
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108259870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108259870
Ubiquitin system [BR:
ipu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108259870
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
108259870
NCBI-ProteinID:
XP_053533069
UniProt:
A0A9F7TDC8
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Position
28:complement(14017654..14020538)
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AA seq
609 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaatgtcaaggctaaaatccaggacaaagaaggcattcccccagaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaat
atccagaaggagtccaccctccacctggtgctgcgtctgaggggtggtatgcagatcttt
gtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagtgacaccattgag
aacgtcaaggctaaaatccaggacaaagaaggcattcccccagaccagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaatatccagaaggag
tccaccctccacctggtgctgcgtctgaggggcggtatgcagatctttgtgaaaaccctg
actggcaagaccatcacccttgaggttgagcccagtgacaccattgagaacgtcaaggct
aaaatccaggacaaagaaggcattcccccagaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaatatccagaaggagtccaccctccac
ctggtgctgcgtctgaggggtggtatgcagatctttgtgaaaaccctgactggcaagacc
atcacccttgaggttgagcccagtgacaccattgagaacgtcaaggctaaaatccaggac
aaagaaggcattcccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctgtccgactacaatatccagaaggagtccaccctccacctggtgctgcgt
ctgaggggcggtatgcagatctttgtgaaaaccctgactggcaagaccatcacccttgag
gttgagcccagtgacaccattgagaacgtcaaggctaaaatccaggacaaagaaggcatt
cccccagaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctg
tccgactacaatatccagaaggagtccaccctccacctggtgctgcgtctgaggggcggt
atgcagatctttgtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaatgtcaaggctaaaatccaggacaaagaaggcattcccccagaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaat
atccagaaggagtccaccctccacctggtgctgcgtctgaggggcggtatgcagatcttt
gtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagtgacaccattgag
aacgtcaaggccaaaatccaggacaaagaaggcattcccccagaccagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaatatccagaaggag
tccaccctccacctggtgctgcgtctgaggggtggtatgcagatctttgtgaaaaccctg
actggcaagaccatcacccttgaggttgagcccagtgacaccattgagaacgtcaaggcc
aaaatccaggacaaagaaggcattcccccagaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtccgactacaatatccagaaggagtccaccctccac
ctggttctccgcctccggggtggactgtaa
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