Ictalurus punctatus (channel catfish): 108264061
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Entry
108264061 CDS
T04658
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108264061 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108264061 (cngb1a)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108264061 (cngb1a)
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108264061
NCBI-ProteinID:
XP_053534209
UniProt:
A0A9F7TE96
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Position
4:7321707..7363861
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AA seq
1321 aa
AA seq
DB search
MFSWVVKVVPQPPEKNAKLEEEGKGDTLQTSEQKAPVKEQEVKKAANPAKPKEDEVSEEN
RTQGGVLAWISQGLTSALPQPAADSDARQQEEDCNSKVNEETGVINWIVQGLGKVVPQPD
DKQKQQTESQEVTEVPKVVPEVKVVHTEIKVVKVEPEPEPPPQVPVVEVVSDAEPEGDKP
LTPRVMEWIKHGLEKVVPQPGHSPSITDTSDKKEPATNTAPPKAPDQSAAEDATKGTNVE
EESNVVSWIAQGLGRIMPQPVLKPKEDTLDTVQSICILQEDFVQEDNLVLEEKLVLEENL
VLEEVDSDWEQQQVEQACLLNAKLEKQAEVHMEDQICPLQDVLNNTIPDIFITQQEDAET
QTERWTPLIENIRREAEEAALISIQERLERERLEAARIAEELARQAAELAVRQLEEEHTV
IRVTESERVSEPDSGEQLSNIQEEENEDDPECLVDVCPVEELKTYKTEITAQITQKEESP
EPPPPKEFTPASQPEIEHAPPRESAVEPEPDGEDHAIAKTPSPVVSPVIITQPETAASGP
STPAVVQEDEAFQEECGECPHVSVEEVDDGSIPIVPQIVEPQESNGVSLTVPVPVMATQR
RAFQPDEQVEEEEKEKEEDLTPRHGLLTVEEDGSERPLSSASQTSVVVNERLQELIKLFK
ERTERTKERLIDPDESEEESPSATPTKKAAAPPPPPPPPPEEKKDVPADDESDEEQFLEF
MGYQVKVPKVPPMPDWLRAIVEYRFPSSIDPFTDLIYVVWLFFVMCAWNYNVWLIPVRWA
FPYQTPENIHLWLLADYLCDTIYILDIAVFQPRLQFVRAGDIVCDKKDMRENYMKTERFK
MDMISLLPLDVLYYFTGVKSILRFPRILKYMAFFEFNDRLEAVMKKAYIYRVIRTSAYLL
YSLHCNACLFYWGSDYEGLGSTKWVYDGRGNSYIRCYYFAVKTLITIGGLPDPTTVFEIV
FQLVNYFVGVFAFSIMIGQMRDVVGAATAGPAYYRSCVDSTVNYMTAYRIPREVQNRVKT
WYDYTWQSQGMLDEQELLIQLPDKMRLDIAVDVNYTIVSKVALFQGCDRQMIFDMLKRLK
SVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGG
NRRTANVVAHGFANLFILDKKDLSEILVHYPESQKILRKKAKKMLTKDTKPQEEKGVGKE
SGQVIPLRPETPKLFKAALEVGKGETFAKLKETYKDAGATLQPSSSTAAPVPPPSPIHRR
SPMQRTVTQDDDDDLVTQTTDSTVIIRMIPRQHGEEILSVEMAEEEDGTAEKTDQEERKE
E
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttgggtggtgaaagttgttcctcaacccccggagaagaatgcaaagctagaa
gaggaaggcaaaggcgatacacttcaaacatcagaacaaaaagcaccagttaaagagcaa
gaggtgaaaaaagcagccaatcctgctaagccaaaagaagatgaagtctcagaagaaaac
aggactcagggtggtgtattggcctggatctctcagggtttgaccagtgccctcccccag
cctgcagcagacagtgatgccaggcaacaggaggaagactgcaatagtaaagtgaatgaa
gagacaggggtgataaactggattgtgcagggattaggcaaagtggttccacaacctgat
gacaagcagaaacagcagacagaatcccaggaggtgactgaggttccaaaagtggtgcca
gaagtaaaggtggtgcacactgagattaaagtggttaaagtggagcctgagcctgagcct
ccacctcaagtccctgtggtggaggtggtttctgatgcagagcctgaaggagacaagccg
ttaactcccagggtgatggagtggataaagcatggtttggagaaggttgttccacagccg
ggacactctccatctattacagacacttcagataaaaaagaacctgctactaatactgca
cctccaaaggcacctgatcaatcagcagctgaggatgcaaccaagggaacaaatgtggag
gaggaatccaacgtggttagctggattgcgcagggactcggtcgcattatgccacagcct
gttctgaagccaaaagaggacactttggatacagttcagagcatttgcatcctgcaggaa
gactttgtgcaggaggacaacctggtgctggaggagaaactggtgctggaggagaacctg
gtgctagaggaggtggactcagactgggagcagcagcaggtcgagcaagcttgtttgctc
aatgccaaactggagaaacaggctgaagttcatatggaggatcagatttgccccctgcag
gatgtcctaaacaacaccatacctgatatcttcatcacacagcaggaggatgctgagaca
caaacagagcgctggactcctctaatagagaacattagacgcgaggctgaggaagctgcc
ttgatctccatacaagagaggctggagcgtgagcgtctggaggcggcgaggatagcggag
gagttggcacgccaggctgctgaattggcagtaagacagctggaggaggaacacactgta
atcagagtcacagagtcagaacgtgtgtctgaaccagacagtggagagcaactttccaat
atccaggaggaagagaatgaagatgacccagagtgtcttgtggatgtgtgccctgttgag
gagcttaaaacatataaaactgagattacagcgcagatcacacaaaaagaggagtcaccc
gagccacctcctccaaaggaattcactcctgcaagtcaacctgagatagaacacgcccca
ccacgagagtcagctgtcgaaccagaacctgatggagaagatcatgctatagcaaagacc
ccttcacctgtagtgtctccagtcataatcactcagccagaaacagctgcttcaggtccc
tctactccagctgttgtacaggaagatgaggcatttcaagaggaatgtggagaatgtcct
catgtgagtgtagaggaagttgatgatggatccattcctatcgtacctcaaattgttgaa
ccccaggagtcgaacggtgtcagcctcactgttcccgttcctgtgatggccacgcagagg
agggctttccagccagacgaacaagttgaagaggaagaaaaggagaaagaggaagatctg
accccccggcatggcctcctcactgtggaggaagatggttctgagcgtcctctctcttcg
gccagtcagacaagtgttgtggttaacgaacgtctgcaggagctgatcaagctgtttaag
gaacgaacagaacgtactaaagagaggctgattgacccagatgagtctgaagaagagagt
ccctcagcaacacctaccaaaaaggccgccgcacctccacctcctccacctcctccccct
gaggagaagaaagatgttcctgctgatgatgagagtgacgaggagcagttcctggagttc
atgggctaccaagtcaaagtgcccaaggtgccccccatgccagactggctgagagccatc
gtggagtatcgtttcccttccagcatcgatcctttcactgatttgatctatgtagtgtgg
ctgtttttcgtgatgtgtgcttggaactataacgtgtggctgatcccggtgcgctgggcg
ttcccatatcaaactccagagaacatccacctgtggctgctagctgactatttatgtgac
accatctacatcctggacattgcggtctttcagcccaggctacagttcgtccgtgcggga
gatatagtgtgtgataaaaaagatatgagagaaaattacatgaaaacggaacggtttaag
atggacatgatcagtctgttgcccctggatgttctgtactatttcacaggcgttaaatcc
attctgcgcttcccgcgcattttaaagtacatggcattctttgaatttaacgatcgtctg
gaggcagtgatgaaaaaagcctacatttacagagtgatccggaccagcgcgtacttgctc
tattcactgcattgcaacgcctgtctgttctactggggctctgactatgagggccttggc
tccactaaatgggtctatgatggcagaggcaacagttatatccgttgctactactttgct
gtaaaaactctgatcactatcggaggtctcccagatcccacgacggtctttgaaatcgtc
tttcagctagtcaattactttgtgggtgtgttcgctttctcgattatgattggtcagatg
agagatgttgtaggagcagctactgcaggtccggcgtactacaggtcatgtgtggacagc
acggtaaattacatgaccgcctatagaataccacgtgaggttcagaacagagtcaagacc
tggtatgactatacctggcaatcacaaggcatgttggatgaacaggagttgctcatacag
ctgcctgataagatgcgtctggacattgcagtggatgtgaactacaccattgtcagcaaa
gtggccctcttccaaggttgtgacagacagatgatatttgacatgttgaagagactgaag
tctgtggtctacctcccaggagactatgtgtgtaagaagggtgagatcggcagggagatg
tatatcatcaaagctggagaggtgcaggtggttggaggccctgatggtaaaactgtgttt
gtcactttgagggccggatctgttttcggggaaatcagcttgctggcagtaggtggagga
aataggcgcacagctaatgtggtagcacacggcttcgctaaccttttcatcctggataaa
aaggacctctctgagatcttggtgcactacccagagtcccagaaaatactacgcaagaag
gccaagaagatgctaacaaaggatacaaagccacaagaagagaagggtgtgggtaaggaa
tctggtcaggtgatcccattacgaccagagactcccaaactgtttaaggccgccctggag
gtgggcaaaggagaaacgttcgccaaactgaaagagacctacaaagatgctggagccaca
ctacagccttccagcagcacagcagcacccgtgccccctccctcacccattcaccgtcga
tcacccatgcagcgcacagtcacacaggacgacgatgatgacctggtgacacagaccacg
gacagcacggtgatcatccgcatgatcccacgccaacacggagaggagatcctcagtgtt
gaaatggcggaggaagaagatggaacagctgagaagactgatcaggaggagaggaaagaa
gaatag
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