Ictalurus punctatus (channel catfish): 108265409
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Entry
108265409 CDS
T04658
Name
(RefSeq) protein piccolo isoform X1
KO
K05760
paxillin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04370
VEGF signaling pathway
ipu04510
Focal adhesion
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
108265409
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108265409
09142 Cell motility
04810 Regulation of actin cytoskeleton
108265409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108265409
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
LIM domain-containing proteins
Paxillin family proteins
108265409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paxillin
LIM
Motif
Other DBs
NCBI-GeneID:
108265409
NCBI-ProteinID:
XP_053536228
UniProt:
A0A9F7RJ81
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Position
5:complement(16802784..16861800)
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AA seq
1179 aa
AA seq
DB search
MDDLDALLADLESSTAHISKCPVFLPDETPYSFPSSGSLLQDDTSPPPVPPPPSSEALNG
SLQKQADSHHSSQQSLDSAQKSTLSRDRVSPPPPHTEEDHVYSFPNKQKTPSDSSSVAMS
SALGNNLSELDRLLLELNAVQQNTPSYTSTEDAAPPLPPSSSAHYIQENGAHSGITPAAR
DKPLRNGTKGPEEGRPTVESLLNELEGSIPAPVPTPSGLQTEGHLDVPSEQQGRMSATSA
TRELDELMACLSDFKVQSNPSSLGSLNSDPLFDQPNSFATIAEINSPSATVVPTAVSPTP
SLPSKPNCYSLLPSPPVPLELHIVEDSSETVLRSSALKSAPSALHSSTSISAFSSPPLSP
SNPHPDRVISNSDSILSTELESLVVLSQTITATTTTEVSAITSGNQQHIPANTENLLPSK
GTKSTLEFSVPIAKSQSPVSQRGNMKTSHKDNSLIIQASNEVCLVTSPEPVISPISTTVP
VSESPIIQSTSPPKPPSPYITTPPISPVSVPNTSSLSALLPEPFAVTTRPLPPMRPEAPA
LQPSLDDAFDHHLTMNFSKPKSQNVPTSVCKMISAEHPDVFEGMLAAVNHRVVQLDMHTE
CEAGDGLLEDQSDCRSELLDWTDMELKLSYDGADGSMTPMTEASWMDDSLTPSSCPGTPD
AQIDLPTLHPVSTMDRISASGHIKSVIRRTKETPNIHPMYRDGIIRRKMGPVIFHKSNSQ
DRLIEELQGKLGIARKERPKKLPDDWLTEGVIVMSNPKRSRDDHSREVDKIIIPPESPIP
QRKVMPAPQSSSPAPRLPPPAMDPKSRPTPKAAPVPPPPPPTHTPPIPAPSQLPRESTPP
PQLHVELEPPQVEVKPPSPGPVEPPPLPAKPAPTPPQSPPPAPVVPPKVLVSVGCQTEYN
PFFSAMQIMAQGKGPNTQVNKLDNMLGSLQSDLHKLGVKTVAKGVCGACCKPIVGQVVTA
MGRTWHPEHFVCSHCQEEIGSRNFFERDGQPYCERDYHHLFSPRCYYCNGPILDKVVTAL
DRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDLFAPKCGGCARAILENYISALN
SLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMGK
KFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHGCFVKLFS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttagacgcattgctggcggacctggagtcatccaccgctcatatctcaaag
tgtccagtgtttctcccagacgagacgccttactcttttcccagtagtggaagcttgctc
caggatgacacttcccctcctcctgtgccccctcctccatcttcagaggctttgaacggg
tctctccaaaaacaggctgactcccaccactcctcacaacagtctcttgactcagcacaa
aaaagtacattgtctcgagacagagttagtcccccaccacctcatacagaagaggaccac
gtctacagtttccccaacaagcaaaagacaccatcagactcctcatcagtggccatgagc
tctgcactgggcaacaacttgtctgagctggaccgcctgctactggaactcaatgctgtt
cagcagaacacaccatcctacaccagcacagaagatgcagctcccccacttcctccaagc
agttcagcacactatatccaggaaaatggagcccactccggaattactcctgctgccagg
gacaaacctctgagaaatggaaccaaagggccagaagaagggcgtccaactgtggagagc
ctcctgaatgaactggagggctcaatacctgccccagtgcctaccccctctggacttcaa
acagaggggcacttggatgtaccctctgagcaacagggtcgaatgtcagccacctcggcc
acacgagaactggatgagctcatggcctgcttatctgatttcaaggtgcagagcaatcca
agttctttgggctccctaaattctgatccactgtttgatcagcccaacagctttgctacc
attgcagaaattaattctccttctgccacggtagtacctactgcagtttctccaacacca
agtctcccttctaaaccaaactgctactctctactgccctcccctcctgtacccttagag
ttacacatagtggaagattccagtgagactgttctgcggtccagtgccctaaaatctgcc
ccttctgccctccactcttccacttcaatttcagctttttccagtcctccattgtcccct
tcaaatccacacccagatcgggttatcagtaattctgactccatactgagcactgagctg
gagtcgcttgtggttttgtcccagaccatcactgctaccaccaccactgaagtgtctgcc
atcacctctggcaatcaacagcatatccctgccaatactgagaatctacttcccagcaaa
gggactaaatcaactctagagttttctgtgcctattgctaaatctcaaagcccagtgagt
cagcgtggaaatatgaagacctcacataaggacaattctttaataattcaagcttctaat
gaagtctgtcttgtgaccagtccagagcctgttatatctcccatctctacaactgtacct
gtgagtgaatcacccatcatacaatccacatcacctcctaaacctccttctccttacatc
accacacctcccatctctcctgtatcagtgcccaacacctcaagtctgtcagcactgcta
cctgagccatttgctgttaccacaagaccacttccccctatgaggcctgaggcaccagct
ctgcagccttctcttgatgatgcttttgatcatcatctcaccatgaacttcagcaagcct
aaatcccaaaatgtgccgacttcagtttgtaagatgatttcagcagaacacccagatgtg
tttgaggggatgcttgctgcagtcaaccatagggtggtgcagctggacatgcacacagag
tgtgaggcaggagatggacttcttgaggaccagtctgactgcaggagtgaacttctagac
tggactgacatggagctgaagctgtcatatgatggagccgatggctccatgactcccatg
actgaggctagctggatggatgactcccttaccccttcctcctgccctggaaccccagat
gcccagattgacctgcccacattacatcctgtcagtaccatggacaggatttcggcatct
ggacatatcaagtctgtgatcagacgtaccaaggagacacccaacatccatcccatgtac
agggatggcattattcgcaggaagatgggcccagtaatcttccacaaaagtaattctcag
gatcgcctcatagaagagcttcagggcaagctgggaattgctcgcaaggaacgccccaag
aaactaccagatgattggctgaccgagggagtcattgtcatgtcaaatcccaaacgctca
cgagacgaccacagcagggaggtggataagattattattccccctgagtctcctattcct
cagagaaaagtgatgccagctccccagtccagctccccagcccctcgcctcccacccccg
gccatggatccaaagtccaggcctacaccaaaagctgcaccagttccgcctcccccacct
cctacacacactccacctattcctgccccctctcaacttcctagagaatccacacctcca
cctcaactccatgtagaattagagcctccacaagttgaagttaagcccccttctcctggg
ccagtagagcctcctccactcccagcaaagcctgcaccaacaccacctcagtcacctcca
cctgcccctgttgtccctccaaaagtgctggtgtctgtgggctgtcagacggagtacaat
cccttcttctctgcaatgcagatcatggctcagggaaagggtccaaacacacaggtcaat
aaactagacaacatgctgggaagcctgcagtctgacttgcataagctgggtgtaaagact
gtggccaaaggagtgtgtggggcttgctgcaaacctattgttggccaggtagttaccgcc
atgggccgcacgtggcacccagagcattttgtgtgctctcactgccaggaggagatcggt
tctagaaacttctttgaacgtgatggacagccatactgtgagagggactaccatcacctc
ttctctcctcgatgctactactgcaatggtcccattctggataaagtagtgactgctctg
gataggacatggcatcctgaacactttttctgcgctcagtgtggggccttctttggccct
gagggttttcatgagaaagatgggaaggcgtattgccgtaaagattactttgaccttttt
gctcccaagtgtggtggctgtgcccgtgccatactggaaaattatatatctgccctgaac
agcctctggcaccctgagtgctttgtttgtagggagtgttttaccccttttgtgaatggc
agtttctttgagcatgatgggcagccttactgtgaggttcactaccatgagcggcgtggc
tctctctgctccggctgccagaagcccataacaggccggtgcatcacggccatgggcaag
aagttccatcctgagcattttgtctgtgccttctgcctcaagcagctcaacaagggcacc
ttcaaggagcagaacgacaaaccatactgccatggttgctttgttaaactcttcagttag
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