Ictalurus punctatus (channel catfish): 108265496
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Entry
108265496 CDS
T04658
Symbol
sema3gb
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X1
KO
K06840
semaphorin 3
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
ig
Ig_3
Ig_2
I-set
PSI
V-set
Ig_6
Ig_4
YjbF
Motif
Other DBs
NCBI-GeneID:
108265496
NCBI-ProteinID:
XP_017323356
Ensembl:
ENSIPUG00000000541
LinkDB
All DBs
Position
5:21548474..21585948
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AA seq
753 aa
AA seq
DB search
METIRALLPLLLLLLSVCAHSCHGNLRPTPRVYLSYKELLETRTIRPFSFSFNTSDYRIL
HMDQDQGRLYLGSCEYIVSLDMQNINKEPLIIHWPATTQRKAECKMAGKGGQGECANFVR
LIEPWNRTHLYTCGTGAYKPICTFVNRGWRAEEYLFRLVPGYVDSGKGKCPYDPRQENAA
VLINGNLYAGVHVDFMGTDPAIFRTLGDRPAVRTEQYDSRWLNEPVFVKIQKIPDSTEKN
DDKLYFFFREKSLDAAGGSTPSVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGI
DGVETYFDELRDVFIQRTNDERNPMVYALFSTAGSVFKGSAVCVYSMSDIRNVFNGPFSH
KHGHNYQWTPYTGKIPYPRPGTCPGGTFTPGVHSTKAFSDEAVNFVRAHPLMYHPIYPTH
KRPLVVRTGVDYRFTTIAVDMVDAVDGRYEVLFLGTDRGTVQKVIVLPKDTSTTEELILE
EVEIFRTPAPVRTLKISSKRQQLYVSSARGLTQVSLHRCPAYGKACSDCCLARDPYCAWD
GESCSAFTPATKRRSRRQDIKHGDPLRQCRGFNSKVEKRLKETVQFGVEGSSAFLECQPR
SPQATVKWFCQKDGKRKALSRDKDVLKTAHGILLKSLSQSDSGVYHCQATENNFKHTLAR
VALRILDREIVEALTAPDGPSDPERHHQHDKQHHPPPPPPPPQTLPPPGQTHSQPEVTLI
NQYCQSYWKQPHKPKRTNRRHTEKQDPEELLVQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatccgggccctcctcccactcctcctcctcttactgagtgtgtgtgcacac
agttgtcatggcaacctccgcccgacccccagagtgtatctgtcttacaaagagctgctg
gaaacgaggaccatccggccattcagcttctccttcaacaccagcgactaccgaatcctc
cacatggaccaggaccagggccgcctttacctgggcagctgcgaatatatagtgtccctg
gacatgcagaacatcaacaaggagccactcattatccactggcctgctactacccaaaga
aaagcggagtgcaagatggcaggaaaaggaggacaaggagaatgtgcaaactttgtgcga
ctgatcgagccatggaacaggactcatctgtacacatgtggcactggagcttacaagccc
atctgcaccttcgtcaacagaggctggagggctgaggaatatctcttccgactggtgcct
ggctatgtggactctggaaagggaaaatgcccctatgatccacgccaagaaaatgctgcc
gttctaatcaatgggaacctgtatgctggagtacatgtagacttcatgggcacagatcca
gccatattcaggactctaggagacagacctgctgtcaggacagagcagtacgactcacgg
tggcttaatgagcccgtgtttgtcaaaattcagaaaattccagatagtacagagaagaat
gatgacaagctgtattttttctttcgggaaaagagtttggatgcagcaggaggcagcacc
cccagtgtgttggccagagtgggcagagtttgtctgaatgatgatgggggtcaaaggtca
ctggtaaataagtggacaactttcctgaaagcacgtctggtctgttctgtaattgggata
gatggagtagagacatattttgatgaactaagggatgtcttcattcagcggactaatgat
gaacgcaatcctatggtgtacgctctgttctccactgctgggtctgtgtttaaaggctca
gcagtgtgtgtgtattccatgtctgacatcagaaatgtctttaatggacccttttctcat
aaacatgggcacaattaccagtggacgccttacactggaaagattccttatccgcgcccc
gggacgtgtcctggaggaacatttactcctggagtccacagcaccaaagccttctctgac
gaagctgtcaactttgtgcgcgctcaccctcttatgtatcatcctatataccctacacac
aagcgccccctggtggtgcggacaggtgtggactaccgcttcaccactatcgctgtggac
atggtggatgctgtggatgggagatatgaggtgctctttctgggaacagacagaggaaca
gtccaaaaggtgattgtactaccgaaagatacaagcacaaccgaagagctcattcttgaa
gaggtggagatttttaggacacctgcaccagtgagaactctgaaaatttcctctaaaagg
caacagctgtacgtgtcatcggcacgaggacttacccaggtgtctttgcatcgctgtcct
gcgtatggtaaagcctgctcagactgctgcctggccagagacccctactgcgcctgggac
ggagagagctgctctgctttcaccccagccaccaagaggagaagcaggagacaggatatc
aaacatggcgacccgttacgtcagtgcaggggcttcaactctaaagtagagaagcgtctg
aaggaaacggtgcagttcggagtggagggcagcagtgcatttctggagtgccagcccagg
tctcctcaagctactgtgaagtggttctgtcagaaagatggcaagcgtaaagcgctcagt
cgtgataaagatgtcctgaagacggctcatggcatcctgctgaaatctcttagccaatca
gactctggtgtctaccactgccaggccacagagaacaacttcaagcacacgctggcccgt
gtggccctgcgtattctcgaccgtgagattgtggaggcccttacggctccagacggcccc
tcagatcctgagcgccatcaccaacacgacaagcagcatcacccacctcctcctccaccc
ccacctcaaaccctgcccccaccaggccagacacactcacagcccgaggtgacgctcatc
aaccagtactgccagtcctactggaagcagcctcacaagcccaagcgcactaaccgcagg
catacagagaaacaggaccctgaggagctgctggtgcagtga
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