Ictalurus punctatus (channel catfish): 108265500
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Entry
108265500 CDS
T04658
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
ipu
Ictalurus punctatus (channel catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PDZ_6
PH_10
PH
AIPR
Motif
Other DBs
NCBI-GeneID:
108265500
NCBI-ProteinID:
XP_017323364
Ensembl:
ENSIPUG00000003623
UniProt:
W5U693
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All DBs
Position
5:complement(22802061..22893634)
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AA seq
1616 aa
AA seq
DB search
MEEDSARENAEQPRCKDSERQLRLRLCVLNELLNTERDYVRTLAFLQSAFLQRIRQMGEN
QQCLTPEQVKILFSNIEEILDVHREFFSAMEASLQPEPQPQHALGHVFLQFRDRFSVYGE
YCSNHEKALRLLMELNKIPHIRTFLLHCMLLGGKKSTDVPLECYLLSPIQRICKYPLLLK
ELLKRTAKKHADYPAVEEALQAMKEVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTD
ICTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVSGKKSTKRTKSINGPLYVFR
GRINTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNAEDKQKWLDAIL
KEREQRESLKLGMERDAYVMIAEKGEKLYHMMMTKSRHLIKDRRRKLTIVPKCFLGNEFV
AWLLESGEISKPEEGINLGQALLENGLIHHVSDKHQFKNEQVLYRFRYDDGTYKARSEME
DIVSKGVRLYCRLHSMFIPVIKDRDHHLKTFKSVLPASKLVDWLVSQGDCSTREDAVTLG
VGLCNNGFMHHVLEKSEFKDESQFFRFHADEETEGTGTKTKQLRNDFKLIENIMAKSLVI
HPEEEDYGFEIEEKNKAIMVKSVTRGSHAEMVGLQAGRKIYSINEDLVFLRPFSEVEMMI
NQSFCIRRSLRLLVSTKNKELVKIPDCQDGLSFKLRGSCPPYVHAVKKGSEAAAAGLQPG
QCVLKVNGANMSQSSYEEVLEHFSSYRPEQYEKEQGCSQWVYRVYDDMDEQAFSSCLSEN
GSDAEENRCANGTVSGLQHLSLSGDGPLVNVMVDNVHLEHGVVYEYVSSAGIKHHVLEKM
VEPKGCFSLTAKILEAFSKDDNHFVTSCSQLIAQSERVVSMPQYEFRNICDTKLESIRKR
ICRYQQFADELQNKGSPMFKQASSKPHILGCMDFVPTNCHLNLMQVSCPKSTTSAGRAFS
IRFGRKNSFFGLDPDQANLNPMSHTVHCVTSMAAPSWSCMGLDDEEMEGIDGGIEACRRH
TQGEGGLSFLLKQEDTESQDNYICLYNRLDIAVREMKLYVAQIDVLLSSITGPIQPQSSE
PPSYDNVPSTSPGHEEAIQGKRVCFKVNEDDQEDSGHDTMSYRDSYSECNSNRDSVLSYT
SVRSNSSYLGSDEMGSGDELPCDMQIPLDKQDKLHGCLEHLFNQVDSINSLLKGPVMSKA
CEETKHFHPDHTQPEFRHADDWTARCRYILHKNIQEDPWNLPSSIKNLVDSLHRFVEDGR
NQLLLALLKCTDTELQLRRDAIFCQALVGALCTLAEQLVWALNLRYNNNGEYEDDCKEVS
HKWLEQISAIGVLFNFQSTLSPHVREERIMLEDTKAALQDLDKVTVLFRPLENECLVANT
PVHYQVEGSRQAIRVTLYLDSCHFSELPTRLQNGGSLKLHSALFTRALERPEGVAAQDFV
AMEEFQQRINAVSLEKVKFYYRRLRAFYLEKSNLSTGSNSTAMKIDHLLRPLNTLDDLCR
LMQTYMNVKPSAAGHPSGVSVLLVSSELCSRLGACNISMCATGMQRCTLTVSLEQAMNLA
RNHGLIPRCFMQTMDIMRKQGTRVEISAKNLKVMDQMPAFAPRLFKLCLPPSDGDL
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacagcgctcgggaaaacgccgagcagccgaggtgtaaagactcggagcgc
cagcttcgcctgcggctgtgtgtcctgaacgagctgctgaacaccgagcgagattatgtg
cgcactctcgccttcctgcagtcggcctttctccagaggatcagacagatgggagaaaat
cagcaatgtctgacaccggaacaagtcaagatcttgttctccaacattgaagagatcttg
gatgtacaccgggagtttttctcagcgatggaggccagtctgcagcccgagcctcagcct
cagcacgcgctcggccacgtcttcctccagtttagagaccgcttctcagtgtatggagaa
tactgtagtaaccatgagaaagctctccggctgctgatggagctcaataagatcccccac
atccgcaccttcttactgcactgcatgttgctgggagggaagaagagcaccgacgttcct
ctggagtgttacctgctctcgccaattcagaggatctgcaagtacccgctcctgctcaag
gagctgctgaaaaggactgctaagaagcatgcggattacccggccgtggaggaagctctg
caggccatgaaggaagtgtgctccaacatcaacgagacgaagaggcagatggagaaactg
gaggctctcgagcagctccaatcccacatagagggctgggagggaacaaatctaaccgat
atctgtactgagctgctcctccatggcaatctgctgaagatctcagcaggaaacattcag
gaaagggtcttcttcctgttcgataaccttctcgtgtactgcaagaggaagtccagagtt
tcagggaagaagtccaccaagaggacgaagtctatcaacggcccgctgtacgtcttccgt
ggccgaatcaacacggaagtgatggaggtggaaaatgttgaagatggaaccgctgattat
catagcaacaactacactgtgaccaacggctggaagattcacaacacggccaaaaacaag
tggtttgtgtgcatggccaagaatgcagaagacaaacaaaaatggctggatgccatttta
aaggagcgtgaacagcgagagagtctcaaactgggaatggagcgagatgcttacgttatg
atcgcagagaaaggagagaagctctaccacatgatgatgaccaagagccgccatctgatc
aaagatcgccggaggaagctcaccatcgtgcccaagtgcttcctgggaaatgagtttgtc
gcctggctgttagagagtggagaaatcagtaaaccagaggaagggatcaatttgggccaa
gcactgctggagaacggtctcatccaccacgtttcagataaacaccagtttaagaacgag
caggtactgtatcggttccgttacgatgacggcacttacaaagccaggagcgaaatggag
gatatcgtatccaagggtgtgagactgtactgtcgtctccacagcatgttcatacctgtg
attaaagacagagaccaccacctgaagacgtttaaatcagtgttaccagctagtaaactg
gtggactggcttgtctcacagggagactgttctacccgcgaggatgccgtcacactcggg
gtcggcctgtgcaacaacggcttcatgcaccacgtcctggaaaagagcgagttcaaggac
gaatcgcagttcttccgtttccacgctgatgaggagactgagggcacgggcactaaaacc
aagcagcttcgcaacgactttaagctcatcgagaacatcatggctaagtccctagtgatt
catcccgaggaggaagactatggatttgagattgaggagaagaacaaggccatcatggtg
aagagtgtaaccaggggttcccatgctgagatggtggggttgcaggcaggaagaaagatc
tattccattaatgaagacctggtgtttctgaggcccttctctgaggtggagatgatgatc
aaccagtctttctgtatacgccgctctctcaggctactggtttccaccaaaaacaaagag
cttgtgaagattccagactgtcaagacggcctgtcattcaaactgcgtggatcctgtcct
ccatatgttcatgctgtaaagaaagggtcagaggccgcagcagcaggcctgcagcccggc
cagtgtgtgctcaaagtgaacggcgccaacatgagccagagcagttacgaggaggtgctg
gagcacttcagcagctatcggcccgaacagtatgagaaggagcagggttgcagtcagtgg
gtgtaccgtgtgtatgatgacatggatgaacaggcattcagctcgtgcctctcggagaat
ggttcagatgcagaggaaaacagatgtgctaatggaacagtcagcggtctgcaacatttg
tccctgtctggagatggtccactggttaatgtgatggtggataatgttcacctggaacat
ggtgttgtatatgagtacgtgagctcagctgggatcaagcaccatgttctggagaagatg
gtggagccaaagggctgcttcagccttacagcaaagatattggaagccttttctaaagac
gacaaccattttgtgacgagctgcagtcagctgatcgctcagagcgagcgtgtcgtatcg
atgccacagtatgagttcagaaatatctgcgacaccaaactggagagtatacgcaaacgt
atctgcagataccaacagtttgcagacgagctgcagaataagggctcgcccatgtttaag
caggctagcagtaaacctcacatcctgggctgcatggattttgtccccaccaattgccac
ctgaacctgatgcaggtttcatgccccaagagcaccacatcagccggccgtgccttcagc
atccgcttcgggcgcaagaattccttttttggccttgacccagaccaagccaatctgaac
cccatgtcccacacggtccactgtgtgaccagcatggcagccccatcctggagctgcatg
ggcctggatgacgaggagatggagggaatagatggaggcattgaggcatgcaggaggcac
acgcaaggtgaaggaggccttagttttctcctcaagcaggaggacaccgagagccaggac
aactacatctgcctttataaccggctggacatcgcggtcagggagatgaagctctacgtg
gctcaaattgatgtgctcctgtcctccatcaccggtcccatccaacctcagagctctgag
cctccttcctacgacaatgtgccgtctacttctcctgggcatgaggaggccattcagggc
aaaagagtgtgcttcaaagtgaatgaggatgatcaggaggattctggacacgacaccatg
agctacagagactcttacagtgagtgcaacagtaaccgagactctgtgctgtcctacacg
agtgtacgaagcaacagctcttatctagggagtgacgagatgggctcaggagatgagctg
ccatgtgacatgcagattcccctggacaaacaggacaaactacatgggtgtctggagcat
ctgtttaatcaagtcgactccatcaacagcctcctgaaaggaccggtcatgagcaaagca
tgtgaggaaaccaagcatttccaccctgaccacactcagccagaattccgccacgcagac
gactggacagcacgatgcagatacatcctacacaaaaacatccaggaggacccttggaac
ctgcccagctccatcaaaaacctagtggacagtctgcatcgcttcgtagaggatgggagg
aatcagctcttgctggccttgctgaagtgcacagacacggagctgcagttacgacgggat
gcaatcttctgccaggccctcgtgggtgcgctgtgcacactagccgaacaactggtctgg
gcgctcaaccttcgctacaacaacaatggtgaatatgaagacgactgcaaggaggtcagc
cacaaatggctggagcagatctcggcaatcggagtgctctttaacttccagtccactctc
tcgccgcacgtgagagaggagcgcatcatgctggaagacacaaaagcagctctgcaggat
ctggataaagtcaccgtgctcttccgaccattggagaatgaatgccttgttgcaaacacg
ccagtgcattatcaggtggaaggcagtcggcaggcaatccgtgtcacgctttacctggac
agctgtcatttcagcgagcttcctacacgtctgcagaatggaggcagcctcaagctgcac
tcggctcttttcaccagagcattggagaggccggaaggagtggcagctcaggactttgtt
gccatggaggagtttcagcagcggatcaacgctgtgtcacttgaaaaagtcaagttttat
taccggagactcagggctttctatttagagaaatccaacttatccaccggctcaaattcc
accgccatgaaaatagatcatctgcttcgacctctcaacaccctggacgacctgtgcagg
ctcatgcagacatacatgaacgtgaagccgagtgcggcgggccacccatctggagtcagc
gtgctgcttgtgtcctcagagctgtgcagccgcctgggggcttgcaacatcagcatgtgt
gctactggcatgcagaggtgcacactgactgtctccctggagcaggccatgaacctggcc
aggaaccacggcctcattccccgttgcttcatgcagactatggacattatgcgcaaacag
ggcaccagagtagaaatctctgccaaaaacctcaaagtgatggaccagatgcctgctttc
gcaccaagactcttcaagctgtgtctcccaccttccgatggcgatctctga
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integrated database retrieval system
