Ictalurus punctatus (channel catfish): 108265938
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Entry
108265938 CDS
T04658
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108265938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108265938
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
108265938
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108265938
Prokaryotic type
108265938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-GeneID:
108265938
NCBI-ProteinID:
XP_017324298
Ensembl:
ENSIPUG00000016435
UniProt:
A0A2D0R0X9
LinkDB
All DBs
Position
5:33672980..33681902
Genome browser
AA seq
518 aa
AA seq
DB search
MMNKVKSTVRNKTRAEKKSNNKLKSGAKKGEPSESPYHRFHDAAELGLFRSRLLSWYDRT
KRALPWRTLAETEKDVDVRTYGVWVSEVMLQQTQVATVIDYYNRWMKKWPTVQKLAAASL
EEVNRMWAGLGYYSRGRRLHEGAQKVVRDLGGEMPKRAEQLLKQLPGVGRYTAGAVSSIA
QGQVTGVVDGNVTRVLCRVRAIGADSVSAHVTDALWKLADALVDPERPGDFNQALMELGA
TVCSPKSPRCAQCPVRTHCHAYGKVRLHQDRGSGRLLGKLDSTPDSSVPDVENCTSAGGC
NLCLSEDWDSELGVQNFPRKPAKKAPRVERTLVCVLRRQCGRDDGEIQYLLTQRPGKGLL
AGMWELPSMLLEADVPEKKHGDLLSTEVQRIVGTVTESLQYVGEVVHIFSHIHQTYVVYS
ASVCECVEGQREQKICWLDQSALQEAAISTGVKKIMKLYYESTSKLQDTKVRDQNTKRKH
IPEAGKGKKAKRAGSAANGGLKQLSVSRFFTTSKPTSS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaagtaaagtctacagtgagaaataagacccgagcagagaagaaatctaac
aacaaactaaagtctggagccaaaaaaggagagccgtccgagtcgccgtatcaccgcttc
cacgatgcggcggagctcggactgtttcgatcccgcctgctgtcctggtacgatcggacc
aagagagcgctgccctggcgtacgctggccgagacggagaaggacgtggacgtcaggacg
tacggagtctgggtgtcggaggtcatgcttcagcagactcaagttgccacggtgatcgat
tactacaaccggtggatgaagaagtggccgacggtgcagaaactcgcagcggcgtcgttg
gaggaggtgaatcggatgtgggcgggactcggatattactcgcgaggacggcgactgcac
gaaggagctcaaaaggtggtgcgtgatctcggtggtgagatgccaaaaagggctgaacaa
cttctgaagcagcttcctggagtcggacgatacacagctggagccgtgagctccatcgca
cagggacaggtgacgggtgtggtggatgggaacgtaacgcgtgtcctgtgtcgggttcgg
gcgatcggggcggacagcgtcagcgctcacgttaccgacgcgctgtggaagttagccgac
gcgctggtggatccggagcgacctggcgattttaaccaggctctgatggagctgggcgcc
accgtgtgttcgccgaaatcccctcggtgcgctcagtgccccgttcgcacgcactgccac
gcctacggcaaggtccgattacaccaggacagaggctccgggagacttctgggtaaactg
gactcgacgccggacagctccgtccccgatgtggagaactgcacgagcgccggcggctgt
aatctgtgtctgtcggaggactgggacagcgagctcggggtgcagaatttcccccgtaaa
cccgcgaagaaggcgcctcgcgtggagcggacgctggtctgcgtgctgcggcggcagtgt
ggccgtgacgacggcgagattcagtacctgctcacgcagaggcccggtaaagggctgctg
gcggggatgtgggagttacccagcatgctgttggaggcggacgtgcccgagaagaagcac
ggagacctgctaagcacggaggtgcaaaggattgtggggactgtgacggagtccttacag
tacgtgggagaagtggtgcacatcttttcccacatccaccaaacgtacgtagtttacagc
gcgagtgtgtgtgagtgtgtagagggacagagagagcagaagatctgctggctcgaccaa
tcagctctgcaggaggctgccatatccaccggcgttaaaaagatcatgaagctttattac
gagtccacaagcaaactgcaggacacgaaggtgagagatcagaatacaaagcgaaagcat
attcctgaagctggaaaaggcaagaaggccaaacgagcaggaagtgcagctaacggcggc
ctgaaacagctctcagtcagccggttcttcaccacctcaaaaccaaccagcagctga
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