Ictalurus punctatus (channel catfish): 108266876
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Entry
108266876 CDS
T04658
Name
(RefSeq) zinc finger protein 345 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108266876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266876
03036 Chromosome and associated proteins [BR:
ipu03036
]
108266876
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108266876
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108266876
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108266876
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108266876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
Zn-ribbon_8
SET
Zap1_zf1
zf_UBZ
Zn_ribbon_SprT
zf-C2H2_11
zf_PR_Knuckle
C1_4
Motif
Other DBs
NCBI-GeneID:
108266876
NCBI-ProteinID:
XP_017326179
UniProt:
A0A2D0R6I2
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Position
6:complement(19734..59565)
Genome browser
AA seq
715 aa
AA seq
DB search
MRSAGDRPRSSRKSRAPDPAPSQLSEEVTETSAAGTSGKVDQQNRGVHLKPTPDGGVKKE
ESLELNGYNHKDDLNNTPDVISIKVEEDDTEDYLYCEVCKSFFFNKCEVHGPPLFIPDTP
VPMGVPDRARQTLPRGLEIRKSGIPDAGLGVFNKGETVPVSAYFGPYQGELVDSEEASGY
SWVIYRSSQCQEYIDAKREMYANWMRYVNCVRNGEEQNLVAFQYQGGILYRCCRPIDPGQ
ELLVWYDEEYPKDLGSTFDSLWNKKCSANEVNTTLLQVFSCSSCPLSHTSQIDLHKHIQR
CHYEDYVRLQKSGEIKHKILPIKGQQTSSTTLGSNTAHKKMQKEVHHCSDCGKSFTHASA
LKSHQRNHTAEKPHHCSLCGKSFTYQSGLRTHQRIHTGEKPYRCSECGKSFAQQGTLQTH
QSNHTGEKPYHCSQCGKSFAYQSHLQIHQRIHTGEKPYCCSQCKRRFNQQSALQRHQRLH
TQQNLHHCSQCGKSFTQLSNLKQHQRIHTGEKPFNCSRCGKSFNRQNHLRRHHRIHTQEK
PYQCSLCRKSFADGGNLKRHQRIHTGEKPYYCSDCGKSFTDQSTLQQHQRIHTGEKPHHC
SQCGKSFTHLSTLQTHQLIHTGEKPHRCLHCGKSFNRPSALQQHQRSHAGEKPYRCSQCG
KSFTIESALQRHQRIHTEDGLYYCSQCGQSFTYLSMFRNHACNATESLHELKLSN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcaggagacagaccacgctcctccaggaagtctcgagctcctgatcctgct
ccttcacagctgtctgaggaggtgacggagacttcagctgcagggacatcaggcaaagtg
gaccagcagaatagaggagtccatctaaagccaacacctgacggcggtgtgaagaaagag
gagtcgctggagctgaacggctacaaccataaagatgacctgaacaacacacctgacgtt
atctccataaaagtggaagaagatgacactgaagactacctctactgtgaggtttgcaaa
tccttcttcttcaacaagtgtgaggttcatggaccgcccctcttcatccctgacactcct
gttcccatgggagtccctgaccgagccagacaaactcttcctcgtggactagagattcgg
aagtccggtattcctgatgcaggtctgggagtgtttaataagggggagactgttccagta
agtgcatacttcggaccctaccaaggagagctggtagacagtgaggaagccagtggatac
tcctgggtgatatacaggagcagccagtgtcaagaatacatagatgccaaaagagagatg
tatgctaactggatgaggtatgtgaattgtgttcgtaatggtgaagagcagaatcttgtg
gcgtttcagtatcaaggagggattctgtatcgttgctgtcgacccattgacccaggacag
gagctcctggtgtggtacgacgaggagtaccctaaagatctcggctctacgtttgactca
ctctggaacaaaaagtgctctgcaaatgaagtaaacaccactctgttacaagtcttctcc
tgctcctcgtgtccactttcccacacatctcaaattgacctccacaaacacatccagaga
tgccactacgaagactatgtaagactgcagaaatcaggagagattaaacacaagattctt
cccataaaaggtcagcaaacctcatctaccactctcggctcgaacacggctcacaaaaaa
atgcagaaggaagttcaccactgctcagattgtggaaagagttttacacatgcgagtgct
ctcaaatcacaccagcgcaatcacacagcagagaagccacatcactgctcactgtgtggg
aagagttttacttatcagagtggtctcagaacacaccagcgcattcacacaggagagaag
ccgtatcgttgctcagagtgtgggaagagttttgcgcaacaaggtacactccaaacacac
cagagcaatcacacaggagaaaagccgtatcactgctcacagtgtgggaagagttttgcg
taccagagtcatcttcaaatacaccagcgcattcacacaggagagaagccgtattgctgt
tcacagtgtaagaggaggtttaatcaacagagtgccctccaaagacaccagcgccttcac
acacaacaaaatctgcatcactgctcacagtgtgggaaaagttttactcaactgagtaat
ctcaaacagcatcagcgcattcacaccggagagaagccgtttaattgctcacggtgtggg
aagagttttaatcgtcagaatcatctccgtcgacatcatcgcattcacactcaagaaaag
ccgtatcagtgctccctatgccggaaaagttttgctgatggaggtaatctcaaaagacac
cagcgtatacacacaggagaaaaaccatattactgctcagattgtgggaagagctttact
gaccaaagtacactccaacaacatcagcgtattcacacaggagaaaagccacatcactgc
tcgcaatgtgggaagagttttactcacctgagtactctgcaaacacaccagctcattcac
acaggagaaaagccacatcgctgcttacactgtgggaagagctttaatcgaccgagtgct
ctccaacaacaccagcgcagtcacgcaggagagaagccgtatcgttgctcacagtgtggg
aagagttttactatagagagtgctctccaacgccaccagcgcattcatactgaagatggg
ctgtattactgctcacagtgtggacagagtttcacttatctaagtatgtttagaaaccat
gcatgcaatgctacagagtcattacatgagttgaagctgtcaaattaa
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