KEGG   Ictalurus punctatus (channel catfish): 108267322
Entry
108267322         CDS       T04658                                 
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108267322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108267322
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108267322
   GBAF(ncBAF) complex
    108267322
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 108267322
NCBI-ProteinID: XP_017326836
Ensembl: ENSIPUG00000011614
UniProt: A0A2D0R9S5
LinkDB
Position
7:complement(28175769..28196700)
AA seq 372 aa
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMGMSGGMNQSGAPPQPPHGHSMPSDGPPSGPHMQNQMN
GQMPGPNHMPMQGPGPNQPPNMPTGSMNMPPSSHGSMGAYNHAAPSSQGMSSQGQMNMSQ
GQPMGSYGPRPSMNMQPNQGPMIHQQPPTQQYNIPPGGGGQHYQGQQNPMGMMSQGNHVM
GQRPMPPYRPPQQGPPQQYPGQEDYYGEQYSHGGQGAPEGNSQYGQQQEAYQQGPPQPQG
YPAQQQYPAQQAYPGQQQGYGPSQGGPGQYPNYPQGQGQQYGAYRPPQPGPPQGQPQRPY
GYDQGQYGNYQQ
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcggtggctttcgcgcctcacagacaacgcgggaagggtgatattacacccgcgggg
atacagaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagc
aaagggaaaacagcagaatgttcacactaccagcagatgcttcacagaaatttggtctac
ttggccacaatagcagactccaatcagaacatgcagtctctcctcccggccccccccaca
cagaacatgggcatgtcaggaggcatgaatcagagcggtgcgcctccacagcccccccac
ggccacagcatgccctctgacggcccgccttctggcccacacatgcagaaccagatgaac
ggccagatgcccggaccgaaccacatgcccatgcagggcccagggcctaaccagcctcca
aacatgccaaccggctccatgaacatgcctcccagcagccacggctccatgggcgcctac
aaccatgccgctccctcctcccagggcatgagcagccagggccagatgaacatgagccag
ggccagccaatgggaagttacggtcccagacccagcatgaacatgcagcccaaccaaggt
cccatgattcaccagcagcctcccacgcagcagtacaacatcccccctggtggcggcggg
cagcattaccaaggacagcagaaccccatgggtatgatgagccaaggcaaccatgtgatg
ggacagaggcccatgcctccttacagaccacctcagcaagggccgccgcagcagtaccca
ggccaggaggactattacggtgaacagtacagccacggaggccagggggcacctgaggga
aactcacagtatggtcagcagcaggaagcctatcagcaaggcccccctcagcctcagggc
tacccagcacagcagcagtacccagcacagcaggcctacccaggccagcagcaaggctac
gggccttctcaaggtggtcctggtcagtaccccaattacccacaaggccaggggcaacag
tatggagcatatagaccacctcagcctggtcctccacaaggccaaccacagcgcccatac
ggttatgaccagggtcaatatggcaactaccagcagtaa

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