Ictalurus punctatus (channel catfish): 108267322
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Entry
108267322 CDS
T04658
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108267322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108267322
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108267322
GBAF(ncBAF) complex
108267322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
108267322
NCBI-ProteinID:
XP_017326836
Ensembl:
ENSIPUG00000011614
UniProt:
A0A2D0R9S5
LinkDB
All DBs
Position
7:complement(28175769..28196700)
Genome browser
AA seq
372 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMGMSGGMNQSGAPPQPPHGHSMPSDGPPSGPHMQNQMN
GQMPGPNHMPMQGPGPNQPPNMPTGSMNMPPSSHGSMGAYNHAAPSSQGMSSQGQMNMSQ
GQPMGSYGPRPSMNMQPNQGPMIHQQPPTQQYNIPPGGGGQHYQGQQNPMGMMSQGNHVM
GQRPMPPYRPPQQGPPQQYPGQEDYYGEQYSHGGQGAPEGNSQYGQQQEAYQQGPPQPQG
YPAQQQYPAQQAYPGQQQGYGPSQGGPGQYPNYPQGQGQQYGAYRPPQPGPPQGQPQRPY
GYDQGQYGNYQQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggctttcgcgcctcacagacaacgcgggaagggtgatattacacccgcgggg
atacagaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagc
aaagggaaaacagcagaatgttcacactaccagcagatgcttcacagaaatttggtctac
ttggccacaatagcagactccaatcagaacatgcagtctctcctcccggccccccccaca
cagaacatgggcatgtcaggaggcatgaatcagagcggtgcgcctccacagcccccccac
ggccacagcatgccctctgacggcccgccttctggcccacacatgcagaaccagatgaac
ggccagatgcccggaccgaaccacatgcccatgcagggcccagggcctaaccagcctcca
aacatgccaaccggctccatgaacatgcctcccagcagccacggctccatgggcgcctac
aaccatgccgctccctcctcccagggcatgagcagccagggccagatgaacatgagccag
ggccagccaatgggaagttacggtcccagacccagcatgaacatgcagcccaaccaaggt
cccatgattcaccagcagcctcccacgcagcagtacaacatcccccctggtggcggcggg
cagcattaccaaggacagcagaaccccatgggtatgatgagccaaggcaaccatgtgatg
ggacagaggcccatgcctccttacagaccacctcagcaagggccgccgcagcagtaccca
ggccaggaggactattacggtgaacagtacagccacggaggccagggggcacctgaggga
aactcacagtatggtcagcagcaggaagcctatcagcaaggcccccctcagcctcagggc
tacccagcacagcagcagtacccagcacagcaggcctacccaggccagcagcaaggctac
gggccttctcaaggtggtcctggtcagtaccccaattacccacaaggccaggggcaacag
tatggagcatatagaccacctcagcctggtcctccacaaggccaaccacagcgcccatac
ggttatgaccagggtcaatatggcaactaccagcagtaa
DBGET
integrated database retrieval system