Ictalurus punctatus (channel catfish): 108267387
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Entry
108267387 CDS
T04658
Name
(RefSeq) beta-1,4-galactosyltransferase 2
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00052
Galactose metabolism
ipu00510
N-Glycan biosynthesis
ipu00513
Various types of N-glycan biosynthesis
ipu00514
Other types of O-glycan biosynthesis
ipu00515
Mannose type O-glycan biosynthesis
ipu00533
Glycosaminoglycan biosynthesis - keratan sulfate
ipu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ipu01100
Metabolic pathways
Module
ipu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ipu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108267387
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
108267387
00513 Various types of N-glycan biosynthesis
108267387
00515 Mannose type O-glycan biosynthesis
108267387
00514 Other types of O-glycan biosynthesis
108267387
00533 Glycosaminoglycan biosynthesis - keratan sulfate
108267387
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108267387
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108267387
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
108267387
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
108267387
2.4.1.90 N-acetyllactosamine synthase
108267387
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
108267387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
108267387
NCBI-ProteinID:
XP_017326904
Ensembl:
ENSIPUG00000020132
UniProt:
A0A2D0RAM5
LinkDB
All DBs
Position
7:4663003..4822950
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AA seq
379 aa
AA seq
DB search
MSRLMLGRTLERVCKAVLLLCLVHFLIMMILYFDVYSQRFDIFSRFNNGRGANASRWPHH
SYYNYSSARPNATFPSYVPASEQLPLSSKPELNRTHTTPKPIPPCPEIPPGLVGRLLIEF
SSLMSMERVQRENPNVTEGGKYTPPDCRPKQKVAIIIPFRHREHHLKYWLHYLHPILRRQ
KIDYGIYIINQLGEDTFNRAKLLNVGYTEALKDAEYDCFIFSDVDLIPMDDRNLYHCYDQ
PRHFAIAMDKFGFRLPYAGYFGGVSGLSKKQFLKINGFPNEYWGWGGEDDDIYNRITLNG
MKVSRPDVRIGRYRMIKHERDKHNEPNPQRFNKIQNTKNTMRKDGISSLTYRLVSIKKYP
LYTNISVEIGKPPPRPLRG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagccggctgatgctgggccgcactctggagcgggtctgcaaggctgtgctgctgctc
tgcctcgtgcacttcctcatcatgatgatcctctactttgacgtctacagtcagcgattt
gacatcttcagccgtttcaacaacggccgcggcgccaacgcttcacgctggccgcaccat
tcctactacaactactccagcgccaggcccaatgccaccttccctagctatgtacccgcc
tcagaacagctcccactcagcagcaagcctgagctcaaccgcacacacacgacccccaag
cctattcctccttgcccagagataccacctggactggtggggcgtctcctgattgagttc
agctctctgatgagcatggagagggtgcagagggagaatcccaatgtgacggaagggggc
aagtacacgccaccggactgtcggcccaagcaaaaagtagccattatcattccatttcgg
cacagagaacaccacctgaaatactggctccactacctgcaccccatcctacggcggcag
aagatcgactacggaatctacatcatcaaccagcttggcgaggacaccttcaacagggcc
aagctgctaaacgtcggctatacagaggctctaaaggatgccgagtatgactgcttcatc
ttcagcgatgtggacctgatccccatggacgaccgcaacctgtaccactgctacgaccag
ccgcgccacttcgccatcgccatggacaagttcggcttcaggttaccgtatgcagggtat
tttggaggggtctctggcttgagcaagaagcagttcctcaaaatcaacggcttccccaat
gagtactggggatggggaggagaggacgatgatatctacaacaggattacactgaacggg
atgaaggtgtctcggccagacgtgaggatcggccgctacaggatgatcaagcacgagagg
gacaagcacaatgagcccaatccccagaggttcaataaaatccagaatacaaagaacacc
atgaggaaggacggcatcagctcgctgacatatcgcctggtctccattaaaaagtacccg
ctctacaccaacatctcagtggagattggcaaaccccctcccagacctctcagaggatag
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