Ictalurus punctatus (channel catfish): 108267403
Help
Entry
108267403 CDS
T04658
Name
(RefSeq) phakinin
KO
K10379
phakinin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108267403
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
108267403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
PUMA_CC
TolA_bind_tri
TetR_C_13
betaPIX_CC
DUF7972
CAMSAP_CC1
DUF5856
Rod_CreS
DUF3450
Motif
Other DBs
NCBI-GeneID:
108267403
NCBI-ProteinID:
XP_017326936
Ensembl:
ENSIPUG00000002395
UniProt:
W5UDV6
LinkDB
All DBs
Position
7:5336752..5342205
Genome browser
AA seq
433 aa
AA seq
DB search
MPLTRRRSSTLGQAGAERPGSVSRVSTCGTSAPRGTIVGSASSDSTSCLGARVSRRALGI
SSIFLQGLRSTTVPVLPKYAERGHLMGAEGLNSCLLEYRDKVHTLEQLNQQLEEQIHNCL
DRKASSAKMWGTLRQEWEDIYRQVSEAILDNARLVLQTENLQANAEDLKERFEHEQPFRK
AVEEEISSLYKVIDNANFTRTDMETQMERMHAELLDLAKTHEEDVRQLYNQLSSHEVDES
DLPTETSLEQILTFIHSHWEKVLEKTRAETDAFLECKKVDSGDRKLSEEEKVLENLKTEC
NDTNAKIQSLHAETESMRALKRGLENSLNDAKHWHDIELQNLGSVIGKLEAELADVRGDI
EQQQRDYETLLNNKKRLEMEIGMYHGILDGEENRFHPSMSVYVSADAEGQTQTFPEQESS
TDGSEVEKEKTVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgacaagacgccgatcgtccaccctgggccaggctggtgcagaaaggccagga
agtgtgagccgagtgagcacatgcggtacctcagctcctcggggtacaatcgtgggctca
gcatcttccgacagcaccagctgcctgggtgcccgtgtgtcccgcagggcactgggcatc
agcagcatcttcctgcaaggcttgcgtagtaccactgtccctgtgctgcccaagtatgca
gaaaggggtcacctgatgggtgctgagggccttaacagctgtctgctagagtatcgtgac
aaggtacatacccttgagcaactcaatcagcagctggaagagcagatccataactgcctg
gatcgcaaggcctccagcgccaagatgtggggcacactcaggcaggaatgggaggacatc
tacagacaggtgagtgaggccatcctggacaatgctcgacttgtgcttcagacagagaat
ctccaggccaatgctgaagatcttaaagagaggtttgaacatgagcagcctttccgtaaa
gctgtagaggaagagatcagctccctctataaggtgattgataatgccaactttaccagg
acggacatggagacccagatggagagaatgcatgctgagcttctagacttagccaaaact
catgaagaggatgtgagacagctctataaccagttgtctagccatgaggttgatgaaagt
gatctacctactgagaccagtctagaacagatattgacttttatccattcccactgggaa
aaggtccttgagaagacccgggcagagactgatgcattcctagagtgcaagaaggtggac
agtggggacagaaaactgagtgaggaggaaaaagtcctggagaacctgaagacagaatgt
aatgatacaaatgcgaagatccagagcctgcatgctgaaacagagtctatgagagcgctg
aaacgaggcctggagaactccctgaatgacgcaaagcactggcatgacattgagcttcag
aacttgggctcggtcattgggaagctggaggcagagctcgctgatgtgcgtggagacatc
gagcagcaacagcgtgactatgagacactgctcaacaacaagaagaggctagaaatggag
attggaatgtaccatgggatcctggacggagaggagaatagattccacccatcaatgtcc
gtgtatgttagtgcagacgctgaaggacaaacccaaacttttcctgaacaggaaagctct
actgatggttctgaagtggaaaaggagaagacggtgaaatga
DBGET
integrated database retrieval system
