Ictalurus punctatus (channel catfish): 108268171
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Entry
108268171 CDS
T04658
Symbol
mrc1a
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108268171 (mrc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268171 (mrc1a)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ipu04054
]
108268171 (mrc1a)
04090 CD molecules [BR:
ipu04090
]
108268171 (mrc1a)
04091 Lectins [BR:
ipu04091
]
108268171 (mrc1a)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108268171 (mrc1a)
Pattern recognition receptors [BR:
ipu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108268171 (mrc1a)
CD molecules [BR:
ipu04090
]
Proteins
108268171 (mrc1a)
Lectins [BR:
ipu04091
]
C-Type lectins
Others
108268171 (mrc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
UL45
Xlink
Chordopox_A33R
Ricin_B_lectin
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
108268171
NCBI-ProteinID:
XP_017328465
Ensembl:
ENSIPUG00000006475
UniProt:
A0A2D0REZ6
LinkDB
All DBs
Position
7:complement(7704912..7725499)
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AA seq
1455 aa
AA seq
DB search
MKKLHFPLFVLLCLCMALHNTVQLDSSAFLIYNEAHNKCMKVVEPNVAQASDCDLSSDTQ
HFRWISSSRILSISHKLCLGAQDLKEWVRVVLLPCNELSPMQIWECKNETLFGIKGQMLH
LNYGNRHEPNLLLYSGTGSWSRWEIYGSKNDLCSHGYQEMFTIGGNALGNPCQFPFKYGE
KWYAECTLDGRSDGHLWCSTVTDYDMDKKWGFCPTKSSSGWDTDPITGVFYQRNTQSVLT
WHQARKSCQQQDADLLSIMELHEQTYISGLTNILGSSLWIGLNSLDFESGWQWSNGNPFI
YLNWAPGHPLLEPGMNCAALNAGKASKWESTACSSKLGYICRKGNSTTITPSVGKNQPSF
CPTTWVPYSGHCYSLSRTKMMWKDALTACRKEGADLISIHNIEEHSFIISQSGYLPTDEI
WIGLNDQKTQNLFEWSDRTHVTFAKWLVGEPSHTAILREDCVLMKGKEGKWADHMCEKEY
GYMCKKKASTKPAGAPEVISPGCPAGWIRFSSYCYSIAVEAKTFSEAKTACEQSAANLAQ
VADRYENAFLISLIGLRPEKYFWIGLSNTERVERFEWTNKQAVKFTHFNVGMPDRRQGCV
AVRTGTSAGLWDVVTCDSKEKYICKKIAEGVTTTREPPLTQPLSCPSKWIKKDPANCIQV
YKNTKENKKSWLDARNYCKSIGGDLASFHAESETNILPYGGGSEPAWIGFNMLDDNAGFA
WSDGTSSNYENWSYGEPNNYNSNEHCAEASFYYGHRWNDRDCEAYNDWICQIRLGTTPKP
PPTNPPQAEFNITADGWIQFNGSQYYLNNERLDMEAARTFCIKNHSDLVIITGLSEKKFI
FKQISRGTEDQYYIGMTVGLDKSFSWVDGSPVVYTAWNQNEPNFANNDENCVTTYKNGYW
NDINCGVQLPSICKRSVNFVTSTAAPTTVPTGGCSSDWTSFQGKCYKFVGKDSNEEKIWH
DARLYCISQGGNLVSIRSQAEQAFLTTMMLSSRDDVWIGLNDINSEMRFLWTDGKGVKFT
NWAKGYPVSFPDGRRVYGVDVFISKWNIDLAGDSTFDCVIMVKTPDRITGMWKVENCEEK
RGFVCKRNIDSQIQVPATTVSSASYFKLGNNSYKIQTEKMSWDEARRQCKADDADLASML
DSVTQAFITLRTGRLKEPIWIGLNSNVTSGRYRWIDNWLLRYTKWASGEPLRNQACVYIE
TDGTWKTSDCSKSYYSLCKRSPDIAPTDPPELPGHCPEPKKSKVWIPFRGHCYVFIATKN
ENWAHASVECMRMGATLLSVEDALESNFIHRNIEILHDESKSFWIGIHRSYTGEWMWIDN
TVVDYINWAPRSPGTSGDCVEVKSETGLWMNSHCNGYRGYICKTPKIIPPTEKQPEIQPH
VEEASHGYTGIAIAVVLVIIAVAGLAAFLFYKRPTTPVVGECTFDNTLYFNNPARATTTV
DTKGLVTNMEQNENA
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctccactttcctctgtttgtgctgctgtgcctctgcatggctttgcacaac
actgtacagctagacagcagtgctttcctcatctacaacgaggctcacaacaaatgtatg
aaggtggtagagcccaacgtggctcaggccagtgactgtgacttgtcttcagacacgcag
catttccgatggatttcctcttctcggatcctaagcatctcccacaagctgtgcctcgga
gctcaggaccttaaagaatgggttagagttgttctgctcccctgcaacgagctgagtccg
atgcagatatgggagtgcaagaatgagactctgtttggtataaagggccaaatgttgcat
ctgaattacggcaatcgccatgagccaaatttactgctgtactcaggaacgggttcctgg
agccgctgggagatatatggcagtaagaatgatctgtgctctcacggataccaagagatg
ttcaccattggtggcaatgctttgggcaacccctgtcagtttccctttaagtacggagag
aagtggtacgctgagtgcacccttgatgggcgatctgatggacatctttggtgctccacg
gtcacagactacgacatggataagaaatggggtttctgtccaacaaaatcatcatcaggt
tgggacaccgatccaataacaggtgtgttctaccagaggaacactcagtcagtgctgacc
tggcatcaggctcgcaaaagctgccagcagcaagacgctgatctactcagcatcatggag
ctgcatgagcagacatatatatcagggttaactaatatacttgggtcatctctatggatt
ggcctgaatagtctggattttgaaagtggctggcaatggagcaatggaaacccatttata
tatctgaactgggctccaggccaccccttactggagcctggcatgaactgtgcagcactt
aatgctgggaaagcatctaaatgggagagtacagcctgcagtagtaaactgggatacatc
tgccgcaagggaaactccacgaccattacgccttcagtgggtaaaaaccagcctagcttc
tgcccaaccacctgggtgccgtattctggtcactgctactctctctcacgtactaaaatg
atgtggaaagatgctctgacagcctgtcgtaaagaaggagccgatctgatcagtattcac
aatatagaagaacacagctttattatatcacagagtggatacttgcccactgatgaaata
tggatcggtctaaatgatcagaagactcagaacctgtttgaatggtcagacagaacccat
gtcacctttgccaagtggcttgtgggagaaccttcacacacagctatcctcagagaggac
tgcgttctcatgaaaggaaaggaggggaagtgggcagatcacatgtgtgaaaaggagtat
ggctacatgtgcaagaagaaagcctccaccaaacctgcaggggcaccggaggtgatcagt
cctggatgtcctgctggttggatcaggttcagctcctactgctacagcattgcggtagaa
gccaaaaccttcagtgaagccaaaacagcatgtgaacagagtgcagctaacctagctcaa
gttgcagacaggtatgagaatgcttttctcatcagcctgattggtttacggcctgaaaaa
tatttctggattggcctgtccaatacagaacgtgttgaacgctttgagtggacaaataag
caagcagtcaaatttacacactttaatgtaggaatgccagataggcgacagggctgtgtt
gccgtgcgaactgggacttcggcaggattatgggatgtagtcacctgtgatagtaaagag
aagtacatctgtaagaaaatagccgagggtgttactacaaccagagagcctcctctgaca
caacctctcagttgcccctccaaatggataaaaaaagaccctgccaattgcattcaggta
tataaaaatacaaaagagaataagaaatcatggcttgatgcacgcaactactgcaaatcc
attggtggtgatcttgctagctttcacgctgaaagtgaaaccaacattttaccgtatggt
gggggaagtgaacctgcatggattggctttaatatgctggatgataatgctggctttgca
tggtcagatggaacttcatcaaactatgagaactggagctatggggagcccaataattac
aattctaatgagcattgtgcagaagccagcttctactatggtcatagatggaacgatcgg
gattgtgaagcctacaatgattggatctgtcagatacgactgggaacgacgccaaaacct
ccacctaccaaccccccccaagcagagttcaacattacggctgatggctggatccagttc
aacggtagtcagtactaccttaataacgagcgcctggatatggaagctgctcgtacattt
tgcattaagaaccattctgaccttgttatcataactggtctaagtgagaagaagtttata
tttaaacagatttcaagaggcacagaagaccagtactacattggaatgacagtgggatta
gataaatcctttagctgggtggatggttccccggttgtctatacagcatggaaccaaaac
gaaccaaactttgccaataacgatgaaaactgtgttaccacgtacaagaatggatactgg
aatgatatcaattgtggagtacagttaccctctatctgtaaaagaagtgttaactttgtc
accagcacagcggctcctaccactgtaccgacgggaggctgtagttctgactggacctcc
tttcagggaaaatgttataaatttgtagggaaagatagcaatgaagagaaaatatggcat
gatgctcgactatactgcatctctcaaggaggcaacttagtgtccattcggagtcaagca
gagcaagcatttctcaccactatgatgctcagttcacgtgatgacgtgtggattggcttg
aatgatatcaactcggagatgcgcttcctttggacagatgggaaaggtgtcaagttcacc
aactgggccaaaggatatccagtgtcatttccagatggacgccgagtatatggagtagat
gtcttcatctcaaagtggaacattgacttagcaggagacagcacgtttgactgcgtcatt
atggtgaagacaccagacaggattactggcatgtggaaggttgagaactgcgaagagaaa
cgaggtttcgtctgtaagaggaatatcgattctcagatccaagttccagcgacaacagtg
tcatcagcatcatactttaaactgggaaataattcgtataagatacagactgagaagatg
agctgggatgaggcaaggcggcagtgcaaagcagacgatgctgacttagctagcatgtta
gactctgtcacccaggcgttcatcaccctcagaactggcagattgaaagagcctatttgg
atcggactaaacagcaatgtgaccagtggacgataccgttggattgataactggttattg
cgctacactaaatgggcttcaggtgagccactgagaaaccaggcctgtgtatacattgaa
acagatggaacatggaagacatcagattgcagcaaaagctactactccctctgcaaacgc
tcaccagatatcgcacccactgatccccctgaactcccaggacactgcccagaaccaaag
aaatccaaggtctggattcctttccgaggacattgttatgtttttatagccacaaagaat
gagaactgggcccatgcttcagtggagtgtatgaggatgggtgcaacattgctgagtgtg
gaggatgcactggagtccaacttcatccatcggaatattgagattcttcacgatgaatcc
aaatctttctggattggcatccaccgcagctacacaggtgagtggatgtggattgataac
accgtggtggactacattaattgggcaccacggtcacccggtaccagcggcgactgtgtg
gaggtcaaatcagaaactggcttgtggatgaactctcattgcaatggatacagaggctat
atctgcaaaacccccaaaattataccaccaactgagaaacagccggagattcaaccgcat
gtggaagaggcctctcatggctacactggtatcgctatagcagttgtgctggtgataatt
gctgtagcaggactggctgccttcctcttttataaaagaccaactaccccagtagtcggg
gagtgtacgttcgataacacactctactttaacaacccggcacgagccaccactactgta
gacaccaaaggactggttaccaacatggaacaaaatgagaatgcataa
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integrated database retrieval system
