KEGG   Ictalurus punctatus (channel catfish): 108270406
Entry
108270406         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
  KO
K15710  E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108270406
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108270406
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108270406
SSDB
Motif
Pfam: SNF2-rel_dom SHPRH_helical-1st SHPRH_helical-2nd Linker_histone Helicase_C zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 PHD zf-C3HC4_3 zf-RING_5 DUF4777 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 108270406
NCBI-ProteinID: XP_017332552
Ensembl: ENSIPUG00000002900
UniProt: W5U7H5
LinkDB
Position
9:complement(18865620..18879743)
AA seq 1635 aa
MSSRRKRAAPVRMDEETKEKLNWNMHEHRRTEGDFEDLEAFPQSSVSYQPDPVPDVSNAE
VLSCSSLLPAEKEEEEEAGSSMQDFLKDTTELNVPSVFALGSGWKALIGEFELYPKVPVE
LANVTFCLQQTGDVLSINLTSTSSEELTSCPVECSFGGLLLEDLDWLQKRKVIQLCHLSG
EGSVKLKIFLLESGLGRPEFLSEGNGRLRRASQLLQKLMELFHDFIIPEIMENAEEECDT
DLERQNVEELYDYVRHVHQREEQKQSFDVQQPALIPVLRPYQSQAVNWMLIKERYKSEFS
QEQKLHFLWREVITVCGKKLFYNPYTGCLIREFPLAGVDWPGGILADEMGLGKTVEVLAL
ILSHTRQGLKQSTLTLPVGQSVNYYVPPPPLEKQSIKQCEIKPREKITHPAVRVMLLTAI
KEMKVGKGASINAIFTYLRTMYKYDPLKNRNHIKRTLTKTITEGLVEQVKGRGLAGSFKL
GKNYKEKKKKPVTPQKPTGEAPHRRTSRRCAGQEREAVINSSSAASDSEDTMCSLDPPVL
AEEPKQEHDSQADCEKETADCHVANAKPEPMESNENHQLENPQSDITQGSQSEPFHPPIR
ASVVPFNTTDYRFECICGDLGLVDYKARVQCMNCLLWQHAECVNYKEENLATTPFYCPHC
LVAMTPVPTGATLIISPSSICHQWVEEINRHIRSSSLRILVYQGVKRHGFIQPHILAEQD
VVITTYDVLRTELNYVDLPHSNSKDGRRFRNQKRYMAVPSPLVAVEWWRVCLDEAQMVEC
TTAKAAEMALRLTSINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKYWWDQLLYRPYCR
GNTGPLYSVIGQLLWRSAKKDVIDQIQIPAQTEEIHWLNFSPVEGHFYHRQHEVCSQDAL
LKLRKISDWSLKLGSLDRRTVNTILYPLLRLRQACCHPQAVRGEFLPFQKSTMTMEELLK
SLQKKCRVECEEAHRQLVCALNGLAGIHIIRVEFIEAAEMYREVLRSSEEHKDRLKTDSL
QRLHATHNLMELLNAKHPGIPPTLRDDRLKEEAEQLKQHYMTKVSSEVSEAQQNLLPVLQ
NIRDLKRKVNLRSPWWLDVIQQAIQYSVDDDLVGRIQNELTCSYKQQANKLSMADKFRDA
RGLQFLLSTQMDELMTSQKSVQDAVKELEVPPSQEVIEEATACHLRPVRLPLNNCVFCKS
DELFTDYESKLFSHTVKGQTAIFEDMIEDEEGLMDDRLPTTSRGLRAASETERTLKAILS
FAKIRRLDSELIEEGNTFMELFEFWKKEYKVLHEYWMTLRDRVSAIDELGMATERLRVRL
PDEPKPKVLHIIEPHEVEQNRVKLLNDRAVAKSQLQKKLGQFLYLTNLEKSQDKSTGGLN
PEPCPICARSLGQEWAVLTCGHCFCNECISIIVEQYSVGNRKKAIKCAICRQTTSHTEIS
YVFTTQAADQDQEIPVKGSHSTKVEAVVRALKKIQMTDKGAKSLVFSTWQGVLDIIAKAL
FDNNMEFSQINGIHKFQENLSSFKYEENINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQAMLKTAEKSHSATAMKHSEASVFTV
ADLAELFTEDSDTLE
NT seq 4908 nt   +upstreamnt  +downstreamnt
atgagcagcaggaggaaacgtgcagcgcctgtccgtatggacgaagagaccaaggagaaa
ctaaactggaacatgcatgagcaccgcaggactgagggggattttgaggaccttgaggca
ttcccccagtcatctgtgagctatcagcctgaccctgttcctgatgtgagcaatgcagag
gtactcagctgttcctcccttctgcctgcagaaaaggaggaggaggaggaagcagggagc
tccatgcaggacttcttaaaagacaccactgagcttaatgtgccttcagtgtttgcgctg
ggttcaggctggaaagctctgattggagagtttgaactctatccaaaggtccctgttgag
cttgcaaacgttaccttttgcctgcagcagactggagatgttctgtcaataaatctaact
agcacaagctcagaggagctcacaagctgccctgtcgagtgctcatttggtggattattg
ctggaggatttggactggctgcagaaaagaaaggtcatacagctctgtcatttatctgga
gaaggatctgtaaagctaaagatatttcttttggagtcaggattgggacgaccagagttc
ctcagtgaaggaaatggacgcttaagaagagccagtcagctcttgcaaaaactaatggaa
ttgttccatgacttcattatccctgagatcatggaaaatgcagaagaagaatgtgacact
gatctggagaggcagaacgtggaagaactctatgactacgtcagacacgttcaccaaaga
gaagagcagaagcagagttttgatgtacagcaaccagccctcatcccagtgctccggccg
taccagagtcaggctgtcaactggatgctgataaaggaacggtacaagagtgaattctcc
caagaacaaaaactacatttcctttggagggaagtgatcacggtgtgtggaaagaagctg
ttttataacccctacacgggctgtctgatccgggagtttccgctggctggggtggactgg
cctggaggaatccttgctgatgagatggggctgggaaagactgtagaggtgctggccctt
attttgagccacactcgccaaggcctaaagcagagtacgctcaccttacctgtgggacag
tcagtgaactactatgtccctcctcccccattagagaagcaaagtatcaagcagtgtgag
ataaagccaagagagaaaatcacccaccctgctgtccgtgtgatgcttctgactgccatt
aaggaaatgaaagttggtaaaggagcctcaatcaatgccatttttacgtacctccggact
atgtacaaatatgaccctctgaaaaaccgcaaccacattaaaaggacgctgacaaaaact
ataacggaaggtttagtggaacaggtcaaaggtcgaggattagctggctccttcaagctg
ggaaagaactacaaagaaaagaagaagaaacccgttaccccacaaaagccaactggggag
gctcctcacaggagaacatcacgtcgttgtgcaggccaggagcgagaagcagttataaac
tcctcaagtgcagcttctgactctgaggacacaatgtgcagcctggaccctcctgtactc
gcagaggaaccaaagcaagagcatgattcacaagcagattgtgagaaagagaccgcggat
tgccatgtggctaatgctaaaccagagccgatggagagtaatgaaaatcaccagctagaa
aatcctcagtcagatattacccaaggttcacagtcagagccttttcatcctccaattcga
gcatctgtggttcccttcaatacaaccgattaccggtttgagtgtatctgtggggatctg
ggcctggtggactataaagctcgggtgcagtgcatgaactgtctgctgtggcagcatgct
gagtgtgtgaactacaaggaggagaacctggcgactactccattctactgcccacactgc
ctagtggccatgactcctgttcccactggtgccactcttatcatttcccccagttccata
tgccatcagtgggtcgaagaaatcaaccggcacatccgctcttcctctcttcgaatactg
gtgtaccagggtgtgaagaggcatgggttcattcagcctcatatcctggctgagcaggat
gtggtcatcaccacctacgatgtgctgcgtacggagctgaactatgtggatctcccgcat
agtaacagcaaagatggccgacgctttcgtaaccagaaacgctacatggctgtgccaagc
cccctggtagctgtggagtggtggcgtgtgtgtctggatgaggctcagatggtggagtgc
acgacagccaaggctgcagagatggcgctgagactcacatccattaatcgctggtgtgta
agtggaactccagtacaaagaggtctagaagatttgtatggacttgttttgtttctggga
gttgacccatactgggtgaagtactggtgggatcagctgctatatagaccatattgccgt
ggaaacacaggcccactctacagtgtcattggccagctactgtggcgatctgccaaaaaa
gatgttatcgaccagatccaaattcctgctcagacagaagagatccactggcttaacttc
tctcccgtggaaggccacttttaccatcgccagcatgaggtctgctcacaggatgctctg
cttaagttgaggaagatctcagactggtcgctgaaattgggcagcttggaccgtcgcacg
gtcaacaccatcctgtacccactgttgcgcctgcgccaggcttgctgccaccctcaagct
gtcaggggagagtttttgcccttccagaaaagtacaatgacgatggaagaactgctgaag
tccctgcagaaaaagtgtcgtgttgagtgtgaggaggctcacaggcagctggtgtgtgct
ctcaatggtttggcaggaatccacattatcagagttgagtttatcgaggcagcagagatg
tacagagaagtgcttagatcatcagaagaacacaaagatcggcttaaaacggattctctg
cagaggcttcatgctacacacaatttgatggagctactaaatgccaagcatcctggcata
ccacctactcttcgagatgatcgtctgaaagaggaggcagagcagttgaaacaacactac
atgactaaggtcagttctgaagtgtctgaagctcagcagaacctcctacctgtacttcag
aacattagagacctcaaacgcaaggttaacctgcgttccccctggtggttagacgtcatt
cagcaggccattcagtactcagtggatgatgacttggttggccgcatccaaaacgagctt
acctgcagctataaacagcaagccaataaactatcaatggctgacaagttccgggatgcc
cgaggtctccagtttttactcagcactcagatggatgaactgatgacatcccagaaaagc
gttcaggatgctgtaaaagagctagaagttccaccgtcacaggaagtcattgaggaggcg
acagcttgtcacctgaggcctgtgcgccttccgctcaacaactgtgtattttgcaaatct
gacgaactcttcacagattatgagtcaaaattgttttctcacacagttaaaggacagaca
gccatctttgaggatatgattgaggatgaggagggattgatggacgacaggcttcccaca
actagtcgcggtctgcgggcagccagtgagaccgaacgcaccctgaaagccatcttgtcc
tttgccaagatccgccgcctggactctgaacttatagaggagggcaatacttttatggag
ctctttgagttctggaaaaaggagtacaaggtgttgcatgagtactggatgacgttgagg
gatcgagtgtcagccatagatgagctgggtatggctacagaaagactgcgtgtgcgtctt
cctgatgagcccaagccgaaagtgctgcacatcatagagccacatgaggtggagcagaac
agagtgaaactgttgaatgaccgggctgttgctaaatcgcagctacagaaaaagcttgga
cagtttctctatcttaccaatctggagaagtcacaggataaatcaacaggaggtctgaat
ccagagccatgtcctatctgtgctcgctctctgggtcaggagtgggccgtgctcacctgt
ggacactgtttctgtaatgagtgcatttccatcattgtggagcagtacagtgttggcaat
cgaaagaaagctataaagtgtgctatctgcaggcaaaccacttcccacaccgaaatttcc
tatgtcttcaccacccaggctgcagaccaggaccaggaaattcctgtcaaaggaagtcac
tccactaaagtagaagctgtggtccgagcccttaagaaaatccagatgactgacaaagga
gctaaatctcttgtattctctacgtggcagggcgtgctagatatcattgcaaaagcactc
tttgataacaacatggagttctcacagatcaacgggattcataaatttcaggagaacttg
agttctttcaagtatgaggagaatatcaacatcctgctgttgccgttgcacacagggtca
aacggcctgaacatcatcgaggctacccacgtgctacttgtcgagcccattctcaaccca
gcacatgagcttcaggccattggcagagtgcaccgcatcggccaaaccaaacccactttt
gtgcaccggttcctgatcaagtccactatcgaggagcgcatgcaggccatgctgaaaaca
gcagagaaaagtcacagtgctacagccatgaagcactctgaggcatcagtgttcacagtg
gctgacctggctgagcttttcactgaggatagcgacacactggaatga

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