Ictalurus punctatus (channel catfish): 108271198
Help
Entry
108271198 CDS
T04658
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108271198
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
108271198
Prokaryotic type
Methyltransferases
108271198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
SRPRB
cobW
Dynamin_N
ABC_tran
MMR_HSR1_Xtn
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
108271198
NCBI-ProteinID:
XP_017334070
Ensembl:
ENSIPUG00000007198
UniProt:
A0A2D0RVT6
LinkDB
All DBs
Position
10:complement(8909188..8927374)
Genome browser
AA seq
517 aa
AA seq
DB search
MALAGCWRIALYKNVTRPRVYLRCPVVFGRACPVRPVCSRPAPGFEDTIFALSSGRGRCG
VAVVRVSGPDATGAVRALTGLKRALIPRTALLRNITHPASKELLDRGLVLWFPGPHSFTG
EDSAEFHIHGGPAVINGVLQALGSLPGLRPAEAGEFTRRAFHAGKLDLTEVEGLGDLIHA
ETEAQRRQALRQMAGDLGRLYNDWSQHLKHCLAHVEAFIDFSEGELIEDGVLNQVDTAVS
KLQVEIQTHLSDERRGERLRSGVHVVIAGSTNAGKSSLFNLLCQRPAAIVSPIAGTTRDV
VETPLDIGGFPVLLSDTAGLRETDDSVEREGVQRALKRVEVADLTLVVVDSTQLPQEPRM
VPGFLNDYLNNVLPKKMEQGHVQQCLLIINKSDLLPNEHMSIIQRALSDAFTAAAVSILS
CSTGAGLTDFLKMLQERVKTMCADPLVGSPSLTQTRHRTNLQKSIEALSQYHKYRDVDLA
LAAEGLRLGLTCLGRITGKVGTEEILDVIFRDFCIGK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgccggctgctggaggattgccctgtataaaaatgtcacaaggccacgagtg
tacctcaggtgtcctgtcgtctttggtcgggcttgccctgttagacccgtgtgcagtaga
cctgcccctggctttgaggacacgatcttcgcgttgtcttctggtagaggtcggtgtgga
gtagcagtggtgcgtgtgagcggaccagatgcaaccggagctgtgcgcgctctgaccggc
ctgaagcgcgcgctgattccccgcactgcgctcctccgcaacatcacacaccccgcatct
aaggagctgctggaccggggccttgtcctgtggttcccaggccctcacagtttcactgga
gaggacagtgctgagtttcacatacatggaggacctgctgtcattaatggtgttctacaa
gccctgggtagcctgcctggactgaggcctgccgaggcaggtgagtttacccgacgcgcg
ttccatgctggaaagttggatttgactgaagtagagggcttgggggatttgatccatgca
gagacggaagctcagaggagacaagctctccggcagatggcaggggacctcggtcgcctc
tacaatgactggagtcagcatcttaagcattgtttagcgcacgtggaggctttcattgac
ttcagtgagggtgagctcatagaggatggagtcttaaatcaagtggacacggcagtatcc
aagctgcaagtggaaatacagacgcatctctctgatgagcggagaggcgagcgactgcgc
agcggtgtacatgtggtgatcgcaggatccaccaatgcgggcaagagcagccttttcaat
ctactgtgccaacgtcctgcagctattgtgtctcctatagcagggaccaccagagacgtt
gtggagacgccactggacatcggaggttttccggtcctgttgagtgacacggcaggtttg
agggagacagatgacagcgtggagcgagagggcgtccagcgtgccctgaaaagggtggaa
gtggcagatctgacactggtggtcgtcgactcgacacagcttcctcaggagcctcggatg
gtgccaggtttcctgaacgactacctcaacaatgtgctgccaaaaaagatggagcagggt
cacgtgcagcagtgtctcctgatcattaacaaaagtgacctcttgcctaatgaacacatg
agcatcatccagagagccctcagtgacgcgttcactgcggctgcagtcagtattctgtcg
tgcagtaccggagcaggactgactgatttcttgaaaatgttgcaggagagagttaagaca
atgtgtgcggatccgctggtcggcagcccgagtctaactcagacccgccatcggactaac
ctgcaaaagagcattgaggccttgagtcaatatcataagtacagagatgtggacctggcg
ctggccgcagagggactgcgattaggccttacctgcctgggtagaatcactggcaaggtt
ggcactgaagagatcttggatgtgatctttagagatttttgcattgggaaataa
DBGET
integrated database retrieval system
