Ictalurus punctatus (channel catfish): 108274977
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Entry
108274977 CDS
T04658
Name
(RefSeq) exportin-T isoform X2
KO
K14288
exportin-T
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108274977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108274977
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108274977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
IBN_N
HbrB
Motif
Other DBs
NCBI-GeneID:
108274977
NCBI-ProteinID:
XP_017340949
Ensembl:
ENSIPUG00000015271
UniProt:
W5U652
LinkDB
All DBs
Position
14:complement(2350130..2360456)
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AA seq
972 aa
AA seq
DB search
MACESAFSAIMDEQALMGLNPNADACYRQRALAYFEQLKESQDGWEVCAEALAKGVYSDD
HVKFFCFQVLEHQIKYRHVRLTGPQQQLIRETLMKWLQLQLMSAHPEKPFIKNKAAQVFA
LTFVMEYLTLWPKFFFDVLSLVGLNPHGLDIYLRTLMAIDAEVVDRDILHTPEETRRNTL
IKDRMRETCIPALVESWYQILQTYQRSHSELTCQCLEVVGAYVSWIDLNLIANDRFVNLL
LSHMSVEELREEACDCLFEIVNKGMDPVDKTKLVESLSRVLRNAGFFSVKQEEDVDFLAK
FSRLVNGMGQALVLSWTRLTKAADMKVAAETLQALEAKIPLMLQLLMHEDDDISANIVGF
CYDYLHVLKQLPVLTDQQKSNIEAIMLAVMKKLTYDDEYNFENEGEDEAMFVEYRKQLKM
LLDRLAHVSPELLLESVHRVFTSTMQSWQTARFMEVEVAIRLFYMLGEALPASHGAHFSG
DTTKASTLQDMMRTLLSSGVSEYQHTSVTLEFFETVVRYDKFFIVEPQHIPVVLMAFLDH
RGLRHSSPKVRSRVAYLFSRFIKTLHKHMNAYIEDILSRIQDLLALTPPENGFPALLSSD
DQLFMFETAGILIVNGESPADRKQVLMRSLLTPLMEAFRPLLAKLAQESDEERQTALADC
LGHAVGFASRTSKAFSNKQTVRLCGCSGVYLDCLQTFLPALSCPVQRATLRSAVRSFLHR
MIICLEEEVLPFIPSASEHMLKDCEPKDLQEFIPLISQITAKFKSQVSPFLQQVFMPLVL
AIFEVLSRPAEENDQTAALEKQMLRRSYFSFIQTIASSGMNEVMANQGAENIERVLFTII
QGAVDFPDPVAQKTCFIILSRLVELWGGKDGLVGFPDFIYKHILPACFLAPLKPSFDLSD
AQTVLTLSECTLTLKMIHLKRGPEFIQFLQQEYLPSLHVSPEITQELCQVLQQPDTKVLK
NYMKAFFQQAKL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgagtcggctttctccgccatcatggacgagcaggccctcatgggactgaac
cccaacgctgacgcctgctaccgacagagagctctggcgtatttcgagcagctgaaggaa
tctcaggacggatgggaggtgtgcgctgaagcgttggccaaaggcgtctacagtgacgac
cacgtgaagttcttctgttttcaagtgctggagcatcagatcaaatacaggcatgtgaga
ctcactggaccccagcagcagcttattagagagactttgatgaaatggctgcagttgcag
ctgatgagcgcacatcccgagaagccgttcatcaagaacaaggcggcgcaggtgtttgcg
ctcaccttcgtcatggagtacctgacgctgtggcccaagttcttcttcgacgtgctctcg
ctggtgggtctgaacccgcacggcctggacatctatctccgcacgctcatggccattgac
gccgaggtggtggaccgggacatcttgcacacccccgaggagacgcgcaggaacaccctg
atcaaggaccgcatgagagagacgtgcatcccagcgctggtcgagtcgtggtaccagatc
ctgcagacgtatcagcgcagtcacagcgagctcacctgccagtgcctggaggtagtcggc
gcatacgtgtcctggatcgacctcaacctcatcgccaacgacaggtttgtgaatctgtta
ttgagtcacatgtctgtggaggagctgagagaggaggcgtgcgattgtctgtttgagatc
gtcaataagggcatggacccggtggacaaaaccaaactggtggagtctctgtcacgagtg
ctgcgaaatgcaggcttcttcagcgtgaagcaggaggaggacgtggacttcctggctaag
ttctcgcgcctggtaaacggaatgggtcaggctctggtgctcagctggaccagactcacc
aaagcagcagacatgaaggtggcagcagaaaccctgcaggctctggaggccaagatccca
ctgatgctgcagctgctcatgcacgaggatgacgacatttcggcgaatatagtgggcttc
tgttacgactacttgcacgtgctcaaacagcttcctgttcttactgatcagcagaagagt
aacatcgaggccatcatgctggcggttatgaagaaactgacctacgacgacgagtacaac
tttgaaaacgagggcgaagacgaggcgatgtttgtggagtacaggaagcagctgaagatg
ctactggaccgcctggctcacgtctctcctgaactcttactggagtccgtgcatagagtc
ttcaccagtaccatgcagagctggcaaacggcccggttcatggaggtggaggtggcgatc
cgcttgttttacatgttgggagaagccttgcctgcgtcccacggggctcatttcagcggc
gacaccacgaaagccagcactctgcaggacatgatgaggacgctcctctctagtggcgta
agcgagtaccagcacacctccgtcacactggagttctttgagaccgtggttcgctatgac
aagttcttcatcgtggagcctcagcacattccagtcgtcctgatggcgtttctggatcat
cgtggtctgaggcacagcagtccgaaggtgcgcagcagagtggcgtaccttttctccagg
ttcatcaaaacgctacataaacacatgaatgcctatatcgaagacatcctgagccgaata
caggaccttctggcattaactcctcctgaaaacggtttccccgcgctcctgagcagcgac
gatcagctgttcatgttcgagacggccggcatcctgatcgtgaacggcgagagcccggcc
gacaggaagcaggtgctcatgcgcagtctgctcacgccgctcatggaggccttccgccca
ctgctggccaaactggcgcaggagagcgacgaggagaggcagactgcactcgccgactgc
ctcgggcacgccgtgggctttgccagccgcaccagcaaggcgttcagtaataagcagaca
gtgaggctgtgcggctgttccggggtctatctggactgcctgcagacgttcctgcctgcg
ctcagctgtcccgtccaacgggccacgttacgcagcgccgtacgctccttcctccaccgc
atgatcatctgcctggaggaggaggtcctgccgttcatccccagcgccagcgagcacatg
ctgaaggactgcgagcccaaagacctgcaggagttcatccccctcatcagccagatcaca
gccaagtttaagagtcaggtttctccgttcctgcagcaggtcttcatgccgttggttctg
gccattttcgaagtgttatctcggccggcagaagagaacgaccagaccgcagcgctggag
aagcagatgctgaggagaagctacttcagcttcatccagaccatagccagtagcggtatg
aacgaggtcatggccaatcagggtgctgaaaatatagagcgtgtgttgtttaccataatt
cagggagcggtggacttccctgaccctgtcgcccagaagacctgtttcataattctctcc
agactagtggagctctggggaggtaaagacggtttagtcgggtttccagacttcatttac
aaacacattctcccggcatgcttcctggctcctctcaaaccctccttcgacctgtccgac
gcccagactgtcctgaccctgtccgagtgcacgctgacgctgaaaatgattcatctcaag
aggggcccggagtttattcagttcctgcagcaggagtacctgccctctctgcacgtctcg
cctgagatcacgcaggaactctgtcaagtgcttcagcagcctgacactaaggttctgaag
aactacatgaaggccttctttcagcaagcaaagctgtaa
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