Ictalurus punctatus (channel catfish): 108275025
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Entry
108275025 CDS
T04658
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108275025 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108275025 (etf1a)
03012 Translation factors [BR:
ipu03012
]
108275025 (etf1a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108275025 (etf1a)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Release factors
108275025 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
108275025
NCBI-ProteinID:
XP_017341052
Ensembl:
ENSIPUG00000008892
UniProt:
W5U6Y8
LinkDB
All DBs
Position
14:8831121..8852161
Genome browser
AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRVHGAEGNGAENDEKTIYLTPEQEKDK
SHFTDKETGQEHELIECMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDVIFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatccgagcgcagccgacagaaacgtggaaatctggaaaattaagaagctc
atcaagagtttggaggctgccagaggtaacgggaccagtatgatttcgctgatcattcct
cctaaagatcagatctccagagtggccaagatgctggctgacgagtttggcacggcttcc
aacatcaagagcagagtcaacagactgtctgtgctgggagccatcacctctgtacagcag
agactcaaactctacaataaagtgcccccaaacggtctggtagtttactgtggcaccatc
gtgactgaagaaggcaaagagaagaaagtcaacattgactttgagcctttcaaacccatt
aatacctcgctttatctctgtgacaacaaatttcacactgaggctctgacggcgttgttg
tccgacgacagcaagtttggcttcatcgtgattgatggtagcggagcactattcgggacc
ttacagggcaacaccagagaagtgttgcacaaattcacagtggacctacccaaaaaacat
ggtcgtggaggacagtctgcgctccgttttgcacgattgagaatggagaagagacataac
tacgtgcgtaaggtggccgagacggcggtgcagctcttcgtgtccaatgataaagtcaac
gtagctggcttggtgcttgctggttcagcagacttcaagaccgaactcagccagtctgac
atgttcgatccgaggttacaggcaaaggtgctgaagctggtcgacatttcttacggagga
gagaatggtttcaaccaggccatcgagctatcggccgaggtgctctccaacgtcaaattc
atacaggagaagaaactaataggtcgctattttgatgagatcagccaggacacggggaaa
tactgttttggtgtggaggatacgctgaaggccctggagatgggagcagtggagatcctc
attgtttacgagaacctggacaccatgagatacatcctacgagtacatggggctgagggc
aacggagcagaaaatgatgagaagaccatttatttgacacctgagcaagagaaggacaag
tcccacttcacagacaaggagacggggcaggagcacgagctgattgagtgtatgccgctg
ctggagtggtttgctaataactacaagaagtttggagccacgctggagatcgtcacagat
aaaagtcaagagggttcacagttcgtgaagggatttggaggaattggaggtatcttacgg
tacagagtggatttccaggggatggaataccagggagaagacgacgtgattttcgatttg
gatgactactag
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integrated database retrieval system
