KEGG   Ictalurus punctatus (channel catfish): 108275548
Entry
108275548         CDS       T04658                                 
Name
(RefSeq) troponin C, skeletal muscle
  KO
K12042  troponin C, skeletal muscle
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04020  Calcium signaling pathway
ipu04814  Motor proteins
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    108275548
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108275548
   04820 Cytoskeleton in muscle cells
    108275548
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108275548
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     108275548
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_9 EF-hand_FSTL1 AIF-1 EH SPARC_Ca_bdg EF-hand_11 EF_EFCAB10_C Phage_TAC_12 SPEF2_C DUF5580_M DUF7387
Other DBs
NCBI-GeneID: 108275548
NCBI-ProteinID: XP_017341920
Ensembl: ENSIPUG00000018272
UniProt: A0A2D0SI12
LinkDB
Position
15:complement(15656684..15662474)
AA seq 161 aa
MPTEAQTDARSFLSEDMITEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQMKEDQAGKSEEELSECFRIFDKNGDGFIDREEFTDI
LRSTGEPITEEEIEELMIDGDTNKDGKIDFDEFLKMMENIQ
NT seq 486 nt   +upstreamnt  +downstreamnt
atgccgactgaagcccagaccgatgcccgctccttcctgagcgaggacatgatcactgag
tttaaagctgccttcgatatgtttgatactgatggaggcggtgacatcagcaccaaggag
ttgggaaccgtgatgaggatgttgggtcagaatccaagcagagaggagctggatgccatc
attgaggaggttgatgaagatggcagtggcaccattgacttcgaggagttcttggtgatg
atggtgcaacagatgaaggaagatcaggcaggcaagagcgaggaagagctgtctgaatgc
ttccgtatctttgacaagaatggagatggtttcattgaccgtgaggagtttactgacatc
ctacgttccactggagagccaataacagaggaggagatagaagagctcatgatagatggt
gacacaaacaaagatggcaaaattgactttgatgagtttttgaaaatgatggagaacatt
cagtaa

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