Ictalurus punctatus (channel catfish): 108275853
Help
Entry
108275853 CDS
T04658
Symbol
acvr1ba
Name
(RefSeq) activin A receptor type 1Ba isoform X1
KO
K13567
activin receptor type-1B [EC:
2.7.11.30
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108275853 (acvr1ba)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108275853 (acvr1ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108275853 (acvr1ba)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.30 receptor protein serine/threonine kinase
108275853 (acvr1ba)
Protein kinases [BR:
ipu01001
]
Receptor serine/threonine kinases (RSTK): TKL group
TGFBR1 family [OT]
108275853 (acvr1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
TGF_beta_GS
Activin_recp
Pkinase_fungal
FTA2
Insulin_TMD
APH
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108275853
NCBI-ProteinID:
XP_017342379
Ensembl:
ENSIPUG00000008293
UniProt:
W5UCN4
LinkDB
All DBs
Position
15:complement(20693717..20709848)
Genome browser
AA seq
509 aa
AA seq
DB search
MRSDGNLAVMSLRRTVLALLVLIGLIAPGDALKCNCTNCEKSGYECETDGACMASTSYIN
GQEQHVRICIPRESLIPPGQPIFCLSAEGVLNTHCCYTDYCNSVDLQVPNGVPERAIWQG
TSGSWGPVELVAVIAGPVFVFCLLLIVGVFVFQHHQRNYNHRQRLDVEDPSCDHLYLAKD
KTLQDLIFDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIF
SSREERSWFREAEIYQTIMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNH
YTVTIEDMIKLALSAASGLAHLHMEILGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGL
AVRHESVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARR
CNAGGIHEEYQLPYYDLVPSDPSIEEMRKVVCDQRLRPNVPNWWQSYEALRVMGKIMREC
WYANGAARLTALRIKKTLSQLSVQEDVKM
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcgatgggaatctcgcagtcatgtctctgcgaagaaccgtgttagctttgctc
gtgctgattggattaatagcgccgggtgatgctttgaagtgtaactgtactaattgtgaa
aaaagtggctatgagtgtgagacagacggagcttgtatggcctccacttcctacattaat
ggccaggagcagcatgtgcgcatctgtattccacgggagagtctaatcccacctggtcaa
cccatcttctgcctgagtgctgagggagtgctcaacacgcactgctgctacacggactac
tgtaacagcgtcgacctgcaggtccctaatggggttcctgagcgtgcgatctggcaaggc
acgtctggtagctggggtcccgtggagttggtagcagtcatagcaggacctgtctttgtt
ttctgcctgttgctgatcgtcggcgttttcgtgttccagcaccaccagaggaactacaac
caccggcagaggctagatgtagaagatccctcatgtgaccacctttacctagccaaagac
aaaaccttgcaggacctcatattcgacttgtccacctctggctctggatctggtctacct
ctgtttgtgcagaggactgtggcgaggaccatcgtgctgcaggaaattatcggaaagggc
cgcttcggggaggtgtggaggggaaggtggcgaggaggagacgtggctgtgaagatcttc
tcttccagagaggagcgctcctggttccgtgaggctgagatctaccagacgatcatgctc
cggcacgagaacatcttgggcttcatcgcagcagataacaaagataatggcacatggact
cagctgtggttggtctcagactatcatgaacacggctctctgtttgattacctgaaccac
tacacggtcaccatcgaagacatgatcaagttggctctgtcagccgctagtggtcttgca
cacctgcatatggaaatccttggcactcagggaaagcctggcattgcacaccgagacctc
aaatctaaaaacatcctggtaaagaagaacggcacctgcgctatagcggacttgggcctg
gctgtacgccacgagtcagtcactgatacaatcgacatcgcccctaatcagagggtgggc
accaagagatatatggccccagaggtgctggatgaaacgatcaacatgaagcattttgat
tcatttaagtgtgctgatatctatgcattaggactggtgtactgggagatcgcaagacga
tgtaatgcaggaggcatccatgaggagtaccagctgccatactatgacctcgtgccctct
gacccttccatagaggaaatgaggaaggtcgtgtgtgaccagagactgcggcccaacgta
cccaactggtggcagagctacgaggccttgagggtgatggggaagatcatgcgcgagtgc
tggtacgctaacggagcagccagactcacagccctgcgcattaagaagacactctcgcag
ctcagtgtgcaggaggacgttaagatgtga
DBGET
integrated database retrieval system
