Ictalurus punctatus (channel catfish): 108277508
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Entry
108277508 CDS
T04658
Symbol
slc8a2b
Name
(RefSeq) sodium/calcium exchanger 2b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108277508 (slc8a2b)
04020 Calcium signaling pathway
108277508 (slc8a2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108277508 (slc8a2b)
04261 Adrenergic signaling in cardiomyocytes
108277508 (slc8a2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108277508 (slc8a2b)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108277508 (slc8a2b)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
108277508 (slc8a2b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Others
108277508 (slc8a2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
108277508
NCBI-ProteinID:
XP_017345818
Ensembl:
ENSIPUG00000001659
UniProt:
A0A2D0SSZ6
LinkDB
All DBs
Position
17:3597256..3636011
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AA seq
962 aa
AA seq
DB search
MAPSSLSSVVFLLSSCILLSLLPSCASESQRDEEWNVNVTVMESYDNPLSTNGSSKHCGE
VVECFPGIILPVWKPNDSGLGGKIGRAVVYFVSLMYMFLGVSIIADRFMASIEVITSQEK
EVTITMPSGETTVATVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFEAGDLGPSTI
VGSAAFNMFVIIGLCVWVIPNGEVRKIKHLRVFFITAFWSIFAYIWLYLILAIISPGIVE
VWEALVTLSMFPVCVILAWIADRRLLFYKYMSKRYRADKRTGVVVETEGEMSPKGGDVIM
RGKFPPSASAGFITLEHCQDGPNNSAGTMATLLKSNSATINMESTKELDESRKEVIRILK
DLKQKYPKKDLDQLMELANYYALLHQQKSRAFYRVQATRMMIGAGNVLKKHAADHARRTA
VKDVDVSEHDDYATCSRIAFESSHCQCMENCGTLTLAVVCQGGTGENTFYVDYCTEDGTA
NAGSDYEYKEGTLVFKPGETRKEIKVGIIDDDIFEEDEHFFVRLLNLRVGDADGMFETDE
AGQGPKGRLVEPLVTTVTILDDDHAGIFTFSEHIMRVSESVGTMEVTVVRNSGARGTVIL
PYHTEPGTAQGGGIDFEDACGELEFTNDQTMQTIQIRIVDDEEYEKHENFYIVLEEPQWM
KRGISALLINQGDQERQLSAEEEEAKRIVEMGKPILGEHSRLEVVIEESYEFKSTVDKLI
KKTNLALVIGTHSWREQFVDAVTVSAGDGEDEVEGREHPPSCSDYVMHILTVFWKVVFAC
VPPTEYWNGWACFMVSITVIGLLTAVIGDLASHFGCTVGLKDAVTAVVFVALGTSIPDTF
ASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSVAAVYWAVKGESFKVDPGSLAFSV
TLFTVFAFICMAVLIFRRRPSIGGELGGPRIPRLLTSLLFLGLWFLYILFSSLEAYCHIK
GF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcttctctcagctctgttgttttccttctatcctcgtgcatcctcctgtcc
ctccttccatcttgcgcctcagagtcccaaagagacgaagagtggaacgttaatgtcacg
gtgatggagtcatatgataatccgttgtccactaatggcagttcgaagcactgtggcgag
gtggtggagtgttttccagggatcatcctgcctgtgtggaagcctaacgactccggactc
ggaggcaagatcggccgtgctgttgtctatttcgtctctctgatgtacatgttcctgggt
gtgtcaatcatcgcagatcgctttatggcgtccattgaggttattacgtcacaggagaaa
gaagttacgatcactatgcccagcggcgagacgacggtagctacagtacgcatctggaac
gagaccgtgtccaatttaacactaatggcgctaggctcctcggctcctgagatcttactg
tccgtcatcgaagtttgcggtcatggttttgaagcaggtgacctgggtcccagcacgatc
gtcggcagtgccgccttcaacatgtttgtgatcattggtctctgtgtgtgggtgatccct
aacggagaggtgaggaagatcaaacatctgagggtcttcttcatcaccgccttctggagc
atctttgcgtatatatggctttaccttatactcgccatcatctcaccaggaattgtcgag
gtttgggaggccctggtcactctgtccatgttcccagtttgtgtgattttggcctggatc
gctgatcgccgtctcctcttctacaagtacatgtctaagcgttatcgtgccgacaagagg
acaggggttgtcgtggagactgaaggggaaatgtcccctaaaggaggggatgtgatcatg
cgtgggaagtttccaccaagtgcgtcagcaggattcattaccctggaacactgccaagac
gggcctaacaacagcgcaggcaccatggcaaccctgctgaagtccaacagcgctaccatt
aacatggaaagtacaaaagaactggacgagagccgcaaagaggtaatccgtatcctgaag
gacctgaagcagaagtatccgaaaaaagatctggatcagctaatggagctcgccaactat
tacgccctcctgcaccagcagaaaagccgcgccttctaccgcgtccaggccacacgcatg
atgatcggagcaggcaacgtgctgaagaagcacgcggccgatcacgcacgccggacagcc
gttaaagacgtcgatgtgtccgagcacgacgactacgccacatgcagccgcatcgcgttc
gagagcagccactgtcagtgcatggagaactgcggcacgctgaccttagctgtggtgtgc
caggggggaaccggtgagaacaccttttatgtggactactgcacggaagatggtacggcc
aacgctggttcggattacgagtacaaggaaggaacgctggtgtttaagccgggagagacc
aggaaagagataaaggtgggaataatagacgatgatatcttcgaggaggacgagcatttc
ttcgtgcgtctgctaaacctgcgagtcggcgacgccgacggcatgttcgaaaccgacgag
gccggccaggggcccaagggccggttagtggaaccgctggtcaccactgtgaccattctc
gacgacgaccacgcaggcatcttcacgtttagcgagcacattatgcgtgtgagtgagagt
gtgggaaccatggaggtgacggtggtgaggaactcgggtgcccgtggaactgtgatcctg
ccctaccacacagagccgggaacagcccagggaggaggcatcgacttcgaagatgcatgc
ggagagctcgagttcaccaatgaccagaccatgcaaaccattcagattaggatcgttgac
gatgaagaatacgagaagcacgagaacttctacattgtccttgaggaaccgcagtggatg
aagagaggaatctccgctctgctgatcaatcaaggggatcaggaacggcagctgagtgcc
gaggaagaggaagcaaagagaatagttgagatggggaagccgattttgggtgagcacagc
agactggaagtggtcatcgaggagtcctatgagttcaagagcacagtcgataagctgata
aagaagactaacctggccttggttattggcacgcattcctggagggagcagtttgtggat
gcggtgacagtcagtgcaggagatggagaagatgaagtcgagggacgcgagcatccgccc
tcctgctctgactatgtcatgcacattctgacggtgttctggaaggtcgtgttcgcgtgc
gtcccgccgaccgagtactggaacggctgggcttgcttcatggtatccatcaccgtcatt
ggccttctgacggccgtcatcggggacctggcctcccacttcggctgtaccgtgggactc
aaggacgctgtcacggctgtggtgtttgtagctctggggacgtccattccagacacattt
gctagtaaagtggctgctacccaggaccaatatgctgatgcatccattggcaatgtcact
ggcagcaatgccgttaatgttttcctgggcattggcgttgcatggtcagtcgctgcagtg
tactgggcagtaaaaggcgaaagtttcaaagtggatccgggctcactggccttctccgtc
accctcttcactgtttttgccttcatctgcatggccgttttgatcttccggagacggccg
tctatcgggggtgagctaggaggtcctcgaattccacgcctccttacctcattgttgttc
ttgggtctgtggtttctttacattctcttctccagcctggaggcctactgccacatcaag
ggcttctaa
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