Ictalurus punctatus (channel catfish): 108280639
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Entry
108280639 CDS
T04658
Symbol
acss2l
Name
(RefSeq) acyl-CoA synthetase short chain family member 2 like
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00010
Glycolysis / Gluconeogenesis
ipu00620
Pyruvate metabolism
ipu00630
Glyoxylate and dicarboxylate metabolism
ipu00640
Propanoate metabolism
ipu01100
Metabolic pathways
ipu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
108280639 (acss2l)
00620 Pyruvate metabolism
108280639 (acss2l)
00630 Glyoxylate and dicarboxylate metabolism
108280639 (acss2l)
00640 Propanoate metabolism
108280639 (acss2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108280639 (acss2l)
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
108280639 (acss2l)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
108280639 (acss2l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
Motif
Other DBs
NCBI-GeneID:
108280639
NCBI-ProteinID:
XP_017351336
Ensembl:
ENSIPUG00000017496
UniProt:
W5UQX9
LinkDB
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Position
20:complement(17584886..17604252)
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AA seq
674 aa
AA seq
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MVVPGLQNKDERVYFPPKDLQMVAHIPDFNSYLAMYKRSTEEPEEFWREVAQEFYWKKPP
TGQMLQYNFDMTKDKVYIKFMEGAKTNMCYNVLDRNVLDRNLGEKVAYYWEGNSPDHQLT
ITYNQLLKQVCRCANSLKQLGVKKGDRVAIYLPMIPELVFTMLACARIGAVHSIVFAGFS
SESLAERIVDAQCSILVTADGVYRGDKLINLKQISDHALEHCQEKSSFTVQKCLVVKHHA
FRTSNTCNKLQTPWNAECDVWWDDVMNGVSEECEPEWLDAEDPLFILYTSGSTGKPKGIL
HTIAGYLLYTSLTFKYVFDYHHDDVYWCTADIGWITGHSYITYGPLANGATSVLFEGIPV
YPHEGRIWEIIEKHRVSKFYTAPTAIRLLMKFGSEPLQKYDLSCLRVLGTVGEPINPEAW
LWYHDVVGQGRSPIVDTFWQTETGGHVLTPLPAATPLKPGSATLPFFGVQPTILNEHGEE
LEGEAEGYLVFRKPWPGIMRGIYQNQERFQNTYFKKFPGFYVTGDGCRRDKDGYYWITGR
IDDMLNVSGHLLSTAEVEGALSEHPAVAEAAVVSCPHTVKGECLYCFVTLKDSQEFNHKL
KEELKRKVREKIGPIATPDFIQNAPGLPKTRSGKIMRRVLRQIARNEKDLGDLSTLADPK
VVEVLFSQRCEAAA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggttgttccagggcttcaaaacaaggacgagagagtatactttcctccaaaggatctg
caaatggtggctcatattcctgattttaactcatatcttgcaatgtacaaaaggtccact
gaggaacctgaagagttctggagggaggttgcacaggagttttactggaagaaacccccc
acaggccaaatgctgcagtataactttgatatgaccaaggacaaggtttacatcaagttc
atggaaggagccaaaacaaatatgtgctacaacgtgctagaccgcaacgtgctggaccgg
aacctgggcgagaaagttgcatactactgggaggggaactcacctgaccatcagcttacc
atcacatacaaccagcttctgaagcaggtgtgcagatgtgccaattctctcaagcagctg
ggtgtgaagaaaggagacagagtggcaatttacttgcctatgatccccgagcttgtgttc
accatgctggcctgtgctcgaataggggcagtgcattcgattgtgtttgcagggttttct
tccgagtctctggctgagaggatcgtggacgctcagtgtagcatcctggtgacggcagac
ggtgtttaccgaggagataagctgatcaacctgaagcagatttcagaccatgccttggaa
cactgccaagaaaaaagctcctttacagtccagaaatgtcttgtagtgaagcatcatgcc
ttcaggacatctaatacctgcaataagcttcagacaccatggaatgcagagtgtgatgtc
tggtgggacgatgttatgaacggtgtatcagaggagtgtgagcctgagtggctggatgct
gaagacccactcttcatcctctataccagcgggtcgaccggcaaacccaagggaatactg
cacactattgctggctacctgctgtacacttctcttacattcaaatacgtctttgattat
caccatgatgacgtgtactggtgcacagcagacattggctggatcacaggccactcctac
atcacatatggtccattagccaatggggcgaccagtgtgctgtttgaaggcattccagtc
tacccccacgagggcaggatttgggagatcatagagaagcacagagtgtctaagttttac
acagcacccactgccatcaggctgctcatgaagttcgggagcgagccactgcaaaaatat
gatctgtcatgtttgcgtgttctggggactgtaggagagcccataaacccggaagcctgg
ctctggtaccatgacgtagtgggtcagggtagaagccccatagttgacaccttctggcag
actgagacgggaggtcatgttctgactccattgcctgcagcaacaccactgaagccagga
tctgcaacgttaccgtttttcggtgtgcagcccacaatcctgaacgagcacggagaggag
ctggagggagaggctgagggctacctggttttccggaaaccttggccaggcatcatgcgg
ggcatctatcaaaatcaagaacgattccagaacacttacttcaaaaagttcccagggttt
tatgtgacaggagatggatgcaggagggacaaagatggctactactggatcaccggcaga
atagatgacatgctcaatgtctcaggccacttgctgagcacagccgaggtagagggagcg
ttatcagaacacccagctgtggctgaagcggccgtggttagctgtcctcacaccgtgaag
ggcgaatgtctctactgcttcgtcacgcttaaggacagccaggaattcaaccacaaactc
aaggaggagctcaagaggaaagtgagagagaagattggcccgatagccaccccagatttc
atccagaatgccccaggcctccccaaaacccgctcagggaagatcatgcggcgtgtcctg
aggcagatcgcccgcaatgagaaggacctgggtgacctttccactctggctgaccccaaa
gttgtggaagtgctcttcagtcagaggtgtgaagcagcagcatga
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