KEGG   Ictalurus punctatus (channel catfish): 108280674
Entry
108280674         CDS       T04658                                 
Symbol
brwd1
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108280674 (brwd1)
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108280674 (brwd1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 McrBC
Other DBs
NCBI-GeneID: 108280674
NCBI-ProteinID: XP_017351452
UniProt: A0A2D0T9A1
LinkDB
Position
20:7509508..7545695
AA seq 2183 aa
MADRMDKRGSLSLLESELYYLISRFLTTGPCQRAAEVLVSELEEHQLLPRRVDWEGNEHP
RSYEDLIAANKHIAPDHLLQICKQIGPILDKQVPSGLPGVHSLLGTGRHSLLRTAKDCSR
SRWKSSTFAALHRGRPPERPLSCRDAPNLVEVCRGRELTGTQRFSFVHPVSIYQSIKMHK
RILGHLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLHSTLRGHHAEISDLAVNLEN
TLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFAKGSKRYMVSTGTDATVCF
WQWDVKNINFTDRPLKFTERPRPGVQMVCSSFSPGGMFLATGSTDDVIRIYYLGSGSPEK
IAELNSHTDKVDSIQFCNTGERFVSGSRDGTARIWRLHQRHQWRSILLEMSATLPGTVPA
EEESFFKPKVTMVSWDRHDNTVLTAVNNHLLKVWNSYTGQLLHVLKGHEAEVFVLEPHPY
DPRVMLSAGHDGNIFIWDLIRGTKTHHYFNMIEGQGHGAVFDCKFTPDGHRFACTDSHGH
LVIFGFGCSKPYEKLPDQVFFHTDYRPLIRDSNGFVLDEQTQQAPHLMPPPFLVDVDGNP
HPPGYQRLVPGRENVTDEHLVPQLGYVATSDGEVVEQVISQQPAESEDPQARRNLLDNAI
RQLQEQQDQQAGRQQGTPRRVSLSERMEVQSPPNVGLRRSGQVEGVRQMHQNAPRSQMAT
ERDLQAWRRRVVVPELTSSAYSDQESFRIMKGEEEILLYNAKKRRIAHGTFRDDSDDEAV
CIKRAQPRKRRRILEGTNSYVESLIEFSCEEGEETASSEENEIEASEVDSSNEEEDEEWK
SDSSSHSSSEHSDWTADAGITTQAAMCSRRRARRQISSSEEEEVEEEEEEDEDNTAEDEQ
TEQTQDEDAKSSTPRKPRRKAKCKTPKCPKPRQSLNREVSNEFRPSTWITDVIPRKSPFV
PQMGDEVIYFRQGHEAYVDAVCRSNLYPINLEKQPWRKMHLRDQEFVKITGIKYEVCPPT
LCCLKLTQIDTGTGKITNKSFSVKYHDMPDVIDFLVLRQSYDEARSRIWRPNDHFRSVID
DAWWFGTIVCQEPYQPEYPDSHFQCFKVRWDNGEIEKLSPWDIEAIPENAQSPEAVGECV
PVTDEERADILYKPQGDEWGGRSREKECARIVAGIDQLITVDIAAPFSGPVDLAQYPTYC
TVIAYPTDLNSIRMRLKANFYRRLSALIWDTRYIYYNARTFNEPRSKIAQSAKLITDVLL
KFISKPHYTDIMEIYNAVENMEYTEDEDMEDVDAPGTSTGRRAHQQMELVQDRDAWKDAC
KQLLDYMFECEDSEPFRQPVDQNEYQDYLEIIDTPMDLETVRRTLEEDRYENPTELCKDT
RLIFANAKAYTPNKRSKIYSMTLRLSAFFEERIRKIISQYKTAVKSSLKLRRSQRFKKRT
QQQELVLPPPRVESTSQKRAAVKTQEQVEPPTTKSTSAKASTAERHHSKTRRRLSSAYTS
MEDSNKSASSLSESENDSEVSLSESKEEDFPSFSQPFRRETRATRRAIQNREAKRKNVTE
SGSEVDHSTGDDDDDDDDDDYDDEYSGKSGSLKRLQSSRTKSRSTRLTRNSEKRKPEGSG
QVNGLSSRSSRAERRRVRHSSGSDLEHSEGQENMKNADDSDHSRQPRKTAMAAVSKMKLI
DASEEEDTSEHKSRSRTGKRAAVIQSSSESEEHDQQDDSPHVNGHRKHSHEESEDNSNEG
ESENESFDEEDSISRRKLIKKTARDAVCKLKRINESDEEEENQCRTRRRRNHPSNPNTSK
TSDEETETPEAEKHPHQNGRKLDTQDLKYSEKINMTSKSQVVVSASKARTAPGAIALKSG
IKESSASRRKIRSEDEGEGKIEENERSSEEEEITEKRSSLARRNKSGRQAKSQSLDGDSN
TSDSESEPALNQRRKKKEADSSEEWRQSDESEKDKKSFSRRPTLRALPKKKYITDSEEDL
DSEGERQSWNGKSSDSVKDDTNSQPKSSGGSKRKCISTSEESEDREENGKASDESECGKP
PGRKGKRFKKLSESESDSGSRENVVNGPSKKHQSEDELSGGAGQRLKRQSGKRKHSKSYN
SDSSTDSERCQEESSNESQFSRSQSSPKGYAKGRLRGRKQKPAHHKASASDMDSDYSYEK
PRRATRIRTRNLGKRTVNYRDSE
NT seq 6552 nt   +upstreamnt  +downstreamnt
atggctgacagaatggacaaaagagggagtctttcgctccttgaatcggagctttattat
ctaatttctcgctttttaacaaccggtccttgtcagagagcggccgaggttctcgtgagt
gaactggaggaacatcagcttcttccccgtagagtggactgggaaggaaatgaacatccc
agatcgtatgaagacttgatcgctgccaacaagcatattgcaccagaccacttgctgcag
atatgtaagcagatcggtccaatccttgacaagcaggtgccatctggtttgcctggggtg
cattctctactgggaacagggagacactccttacttcgtacagctaaagattgtagccgt
agccgatggaaaagctcgacttttgccgcacttcatcgaggaagaccaccagagaggcct
ttgagctgcagggatgccccaaatctggtggaggtgtgcagaggcagggaattgacaggc
actcagcgtttcagctttgtccatcctgtcagtatatatcagagcatcaaaatgcacaag
aggattctgggacatctctcggccgtttactgcatcgcctttgaccgaacaggatccagg
attttcacgggttcagatgatgccttggtaaaaatttggtcctcttttgacgggaggctc
cactctactctgcgaggacaccatgccgagatctcagacctcgccgtcaacttggagaac
actctcattgcagcggggagctgcgacaaaaccatcagagtctggtgccttcgtacctgt
gccccagtggcggtgctgcagggtcacagtggatctattacctctttacagttttctcca
tttgccaagggctccaaaaggtacatggtctctacaggaactgatgcaactgtctgcttc
tggcagtgggatgtaaagaacatcaatttcactgatcgacccttgaagttcacagaaagg
ccaagacccggtgttcagatggtgtgttcctcattcagcccaggaggcatgttcctagct
acaggaagcaccgatgatgtaatcaggatatactacctgggcagtgggagtccggaaaaa
atagccgagctcaattcacacacagacaaagtcgacagcatccagttctgcaatacagga
gagaggtttgtaagtggcagtcgtgacggcaccgctcgcatctggaggctgcatcagaga
catcagtggaggagcattttgctggagatgtccgccactttgccaggaactgtgcctgcg
gaagaagagagcttcttcaaacccaaggtcaccatggtgtcatgggatcgtcatgacaac
acagttctcactgctgtcaacaatcatctcctcaaagtgtggaactcctacacagggcag
cttttgcatgtgttgaagggccatgaggcagaggtgtttgtgctggagccacacccatac
gatccccgtgtcatgctgtctgcaggtcatgatggcaacattttcatatgggacctcata
cgaggcacaaagactcatcactactttaacatgattgaaggccaggggcatggtgctgtt
tttgactgcaagttcacccctgatggtcatcgcttcgcctgtacagactctcacgggcac
ctggtcatttttggatttgggtgctccaagccttatgaaaagcttccagatcaggtgttt
ttccacactgactaccgcccgttgatccgggactccaacgggttcgtattagacgagcag
acacaacaggcacctcaccttatgcccccgcccttccttgtggatgtcgatgggaatcct
catcctcccggatatcagagacttgtgcctgggagggagaacgtcacagatgagcacctg
gttcctcagcttggatacgttgctacaagcgatggtgaggtggtggagcaggtaatcagc
cagcagccagctgagagcgaggatccacaggcacgtcgcaatctcttagataacgccatc
cgtcagctccaggagcagcaggaccagcaggccgggaggcagcagggtacccccagaaga
gtgtctctcagcgagcggatggaggtgcagtctccgcctaacgtggggctccggcgcagt
gggcaagttgagggagtgcgtcagatgcatcagaacgcaccacgcagccagatggcaaca
gaaagggacctgcaggcatggcgtcgcagggtggtggttcctgaacttacctccagtgca
tacagtgaccaggagtcgttcagaatcatgaagggagaggaggagattttgctatataat
gccaagaaacgcagaattgcacatggcacctttagggatgactctgatgatgaggcggta
tgcattaagcgcgcgcagccacgcaagcggcgccgcattttggagggcacgaacagttat
gtagagagtctgatagagttttcctgcgaggagggagaggagactgcttcctcagaggag
aatgaaattgaagccagcgaggtggactcctcaaatgaagaggaagacgaggagtggaaa
agtgacagctcgagtcactcgtccagcgagcattctgattggacagctgatgctggcatc
accacacaggcggccatgtgctcccgaagacgggctcgtaggcagattagcagttctgag
gaggaggaggtggaggaggaagaggaggaagacgaagataacacagcagaggatgagcaa
actgaacaaacccaggatgaggatgcaaagtcctcaacgcctcggaaaccaaggagaaaa
gcaaaatgcaaaacaccaaagtgtccaaaacccaggcagtccctgaacagagaggtctcc
aacgagtttcgtccctctacctggattaccgatgtcattcctcgaaagtctccttttgtt
ccacaaatgggagatgaggtaatctacttccgtcagggtcatgaggcctatgtggatgca
gtctgcaggagtaatttgtacccaatcaacctggaaaaacagccgtggaggaagatgcat
ctaagagaccaagagtttgttaaaataactgggatcaagtatgaggtgtgtcctccgaca
ctttgttgcttgaaattgacacagattgacactggaacaggcaaaataacaaacaagtcg
ttttctgtgaagtatcatgatatgcctgatgtgattgacttccttgtgctccgccagagc
tatgatgaagcacgcagcaggatctggaggccaaatgatcatttccggtcagtaattgat
gatgcttggtggtttgggaccatagtctgtcaggagccatatcagcctgagtatcctgac
agccatttccaatgcttcaaagtcaggtgggacaatggagaaattgaaaagcttagtcca
tgggacattgaggctattccagagaatgctcagagtccggaggcggtgggtgaatgtgtg
ccagtcacagacgaggaaagagctgacattctgtacaaaccacagggagacgagtgggga
ggcaggagtcgagaaaaagagtgcgcacgcatcgttgccggcatagaccagctcatcaca
gtagatattgctgcacctttctctggcccagtggaccttgctcaatatcccacttactgt
actgtaattgcctaccccactgacctgaactccatccgcatgaggctgaaggccaacttc
tacaggagactgtctgcactaatttgggacacgaggtatatttattacaatgcaaggacc
ttcaatgaaccacgtagcaagattgcacagtcagcaaaactgattacagatgtcctgtta
aagttcattagtaagccacattatacggatattatggagatttacaatgcggttgaaaac
atggagtacactgaggatgaggatatggaagatgttgatgcaccaggcacatctactggg
cgaagggcgcatcagcagatggagctggtacaggacagggacgcatggaaggatgcatgc
aaacagctgctggattatatgtttgagtgcgaggactctgagcctttccgtcagcctgtg
gatcaaaatgagtatcaggattatttagaaatcatcgacactcccatggatctggagacc
gttcgacgaacccttgaagaagaccgctacgaaaaccccaccgaactatgcaaagacacc
agacttatttttgctaatgctaaagcctacacaccaaacaaacgttcaaagatttacagt
atgactctccgtctgtctgcattctttgaggagcgcattcggaaaatcatatcccaatac
aagactgcagttaaaagcagtttgaagctgagacggagtcagaggtttaaaaagagaact
cagcagcaggaactcgttcttcctcctcccagggttgaatccactagtcagaagagggct
gctgttaaaactcaggaacaagtagaaccacctacaaccaaatctacctcggctaaagcc
tctacagccgagcgccatcacagtaagacgagaaggcggcttagttctgcctacacgtcg
atggaggactccaataaaagtgcatcatctctgtcagaatctgaaaatgacagtgaagtc
tcattgagcgaatcaaaggaagaagatttcccctcgttttctcagccattcaggcgtgaa
acaagagcgacgcgaagagccattcagaacagagaggcgaagagaaagaatgtcactgaa
agcggaagtgaggttgaccactcgactggggatgatgatgatgatgatgatgatgatgat
tatgatgatgagtattctgggaagtccggctcattaaaacgactgcagtcgagcagaacc
aaaagcaggagcacccgactcactcggaactctgagaaaagaaagccagagggtagtggt
caggtgaacggtcttagcagcagatcctcccgtgcagagcgcagaagagttcgacacagc
agtggctctgacctggaacattctgaaggtcaggagaatatgaaaaacgcggatgactct
gaccacagtcgccagcccaggaaaaccgctatggctgcagtcagtaagatgaaactgatt
gacgcatccgaggaagaggatacctcggagcataagtctcgttccaggaccggaaaacgt
gctgcagttatccagagcagctcagagtctgaggagcatgaccagcaggatgattctcct
catgtcaatgggcacagaaagcatagtcatgaagagagtgaggacaacagcaacgaggga
gaaagtgagaatgaaagttttgatgaggaggattccatcagcaggcgaaagttaatcaag
aaaactgcaagagatgcagtatgtaagctaaaacgaattaatgagagtgatgaggaggaa
gagaatcaatgtagaaccagacgccggagaaatcacccaagcaatccgaatacctcaaaa
acgtctgatgaggaaacggaaactccagaggctgagaagcaccctcatcaaaatggaaga
aaattagacacacaggaccttaaatactctgagaaaataaatatgacgtcaaaaagccaa
gtagtagtatctgcctcaaaagctcgtacagctcctggagccatagcattaaagtcaggt
atcaaggaatccagtgcttcaaggagaaaaatcaggtctgaagatgaaggagaggggaaa
atcgaggagaatgagcgcagtagtgaagaagaagaaatcacggaaaaaagaagctcgctg
gcaagaaggaacaaatcaggaagacaagccaagtctcagagtttggatggcgactcaaac
acttccgactctgagagtgaacctgccttaaaccagagacgtaagaaaaaagaggctgat
tcttctgaagagtggcgacaaagtgatgaatcagaaaaggataagaaatcgttttccaga
agacctactctaagagccctccccaagaagaaatacatcaccgactcggaggaagacctt
gattctgagggagaaaggcagtcatggaatgggaaaagctctgattcagtgaaggacgac
accaacagtcagccaaaatcatcaggaggatcaaaaaggaaatgtatcagcacttctgaa
gaatctgaagacagagaagaaaatggtaaggccagtgatgaaagtgagtgtggcaaacct
ccagggaggaaagggaagcggttcaagaaactttcagaatctgagagcgattctggaagt
agggagaatgtggtgaatggtccttcaaaaaagcatcaatctgaggatgaactctctgga
ggtgctggtcagcgattaaaacggcagtctgggaaacggaagcacagcaagagctacaac
agtgatagcagcacagactctgagaggtgccaggaggagtctagcaatgagtcgcagttc
tccagatcacaaagcagtccaaaaggatacgccaagggaagactgaggggtcgaaaacaa
aaacctgcacatcacaaagcatctgcttctgatatggatagtgactattcctatgaaaaa
cctcggcgagccacacgcattcggacccggaatcttggcaaacggactgtaaactacaga
gacagcgagtga

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