Ictalurus punctatus (channel catfish): 108280913
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Entry
108280913 CDS
T04658
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280913 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108280913 (rorcb)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108280913 (rorcb)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108280913 (rorcb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108280913
NCBI-ProteinID:
XP_017351904
Ensembl:
ENSIPUG00000015615
UniProt:
A0A2D0TB55
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All DBs
Position
20:16533474..16574521
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AA seq
476 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLAREPEEAGEDSGLSRSY
SSTGSSTSFSDLDDITTLPNGLLFDLPLTPGEAAEYCAFDLLEGGVSSATGSAASSSSSN
QSSPEPSMLDIVETGRMKHEYQLLPEPSLLTHTLLGALSDDCSLLDIERITQNVVKSHIE
TCQYSTEELKRLTWNLYTPEETRSFQLKSAEWMWQQCAVHITNAIQYVVEFAKRISGFMD
LCQNDQIILLKAGCLEVLLIRMCRAYNSTNNTMFFNGKFASPQLFKALGCDDLVNAIFEL
AKSLCRLQLSEEEMALFSAAILLSPDRPWLTESQQVQKLQEKVYLALQHSLHMGGGSQEK
LDKMASKLPQMKSICNLHIDKLEFFRLLHPETAFSFPPLYREVFGSEINFPDSTDS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccatgtaagatctgtggtgacaagtcctctgggatc
cattatggtgtcatcacctgtgaaggctgcaagggattttttcggcgcagtcagcagaac
aatgctatgtactcatgctctcggcagaggaactgcctgatcgaccgcacaaaccgcaac
cgctgccagcactgtcgtctccagaaatgcttggcactaggcatgagccgagatgcggtg
aagtttggacgcatgtccaaaaagcagcgtgacagcctgtacgcggaggtgcagcggcac
cagcagctggcgcgcgagcctgaggaggcgggcgaggacagcggactcagccgctcgtac
agcagcacaggttccagcacctccttcagtgatctagacgacatcaccacgctacccaac
ggcctgctctttgacctgccactcacaccaggggaggcagctgaatactgtgcctttgac
ctgcttgagggcggggtcagtagtgcaacagggagtgcagcgagcagcagctcatccaat
cagagctctccagagcctagcatgctggatatagtggaaacaggccgaatgaagcacgag
taccagctgcttcctgagcccagcctgctcacgcacaccctgttgggggcattatccgat
gactgctctttgcttgatatagagcggatcactcagaatgtggtgaaatcacatatagag
acgtgtcagtacagcacagaggagctgaaacgactaacttggaacctatatacgcctgag
gagacccgctccttccagctcaagtctgctgagtggatgtggcagcagtgtgccgtgcac
atcaccaacgccatccagtacgtggtggagtttgccaagcgcatcagcggcttcatggac
ctctgccagaacgaccagattatcctccttaaagcaggctgcttagaggttctgctgatc
cgcatgtgccgtgcgtacaactccaccaacaacacaatgttcttcaacggcaaatttgcc
agccctcagctctttaaagcactaggctgtgatgacctggtgaatgccatctttgagttg
gccaagagcctgtgtcgcctgcagttgagtgaggaggagatggccctattcagtgccgcc
atcttgctatcacctgatcgcccgtggttaacagagagtcagcaggtgcaaaagctgcag
gagaaggtttatttggccctgcagcacagcctgcacatggggggaggcagtcaggagaaa
ctggacaagatggcgtccaagctgccgcagatgaagtcaatctgtaacctccacatcgat
aaactggagtttttccggctgcttcaccccgaaacggccttcagctttcctcctctctac
agggaagtgttcggcagcgagatcaacttccctgactccactgacagttag
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