Ictalurus punctatus (channel catfish): 128628836
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Entry
128628836 CDS
T04658
Name
(RefSeq) semaphorin-4E-like isoform X1
KO
K06521
semaphorin 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
128628836
CD molecules [BR:
ipu04090
]
Proteins
128628836
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
I-set
Ig_3
Ig_2
ig
V-set_CD47
Ig_6
Motif
Other DBs
NCBI-GeneID:
128628836
NCBI-ProteinID:
XP_053529752
UniProt:
A0A9F7R6Q5
LinkDB
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Position
20:16817934..16833237
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AA seq
754 aa
AA seq
DB search
MDMLFLLILCFFGTAILTSGQVGPLYSTPRKTVTLNSNRGHVFREEGVWNYSTMLLREDI
GVLILGAREAIFALDLTNITHKQAMVKWDVSPDNKKMCSYKGKNLETECHNYIRILHKMP
DGRMYVCGTYAFSPTCDYMSYTEGNLTLESKQHKGKGKCPFDPFQRYASEFVDGELYSAT
SMNFLGSEPVVMRSSNKTIRTDYYSSWLSEPQFIGMKYVAEGKENPEGDDDKIYLFFSET
AMEYDSYNKLDVSRVARVCKGDMGGQRTLQRKWTSFLKAPLDCPVLQTRLPYIIQDVFLF
CPGSWTTCVFYGVFTPQMDALQYSAVCTYSIHSIREVFSEGRFKTLYNDRSVFNKWVTYY
GDVPDPRPGACINNDARKKMISTSLDLPDKTLLFVRAKPLMDEAVKPSSQQPLLVKKGAA
FTRIVVASTTALDGSTHQVMFIGTASGSVLKAVNYDGKMVIIEEVQLFKHSEPVKILRLS
NTMGQLYAGSNEAAVQMSLSACDHYISCIDCVLARDPYCGWNLNTSSCIAINSIDPDTHS
EVVQSLRDGHATHCPAVESTKTIKTFYPGNVVRLPCQPGSNLAQVQWRVNDHPVENSNMY
HIQHNSLFILNASDSDAGHYTCTSVESSNGKDYVIQTVTYELRLGNYMGHPSVLALVQEQ
LNTPLILRAMVIIISLLLVALLIWNFYQGNCPVLRCFNKAVERPQPMSGFQEPLQIVDRN
KAASVGCSSNSNNNHNRTTELPSTGSQHNGDNIV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggacatgttgttcctcctcatcctgtgtttttttgggacagccatattgacttctggc
caggttgggcctttgtacagcacaccacgcaaaacagttactctgaacagtaacagagga
catgtttttcgagaggagggagtgtggaactactccaccatgctcctgagggaagacatt
ggtgtgctcatcctgggagctcgagaggccatctttgccttggacctcactaacatcacg
cacaagcaggctatggtaaagtgggacgtgtctccagacaacaagaagatgtgttcatac
aaagggaaaaatttggagactgagtgtcacaactatatccggatccttcataaaatgcca
gacggcaggatgtatgtgtgtggtacctatgctttcagtccaacttgtgattatatgtct
tatacagagggtaacctgactctggaaagtaaacagcataaggggaagggaaagtgtcca
tttgatcctttccagagatacgcctctgaatttgttgatggagagctgtactctgctaca
tctatgaatttcctgggctctgaaccggttgtgatgcgaagctctaataaaactatacga
actgattactactcttcctggctcagtgaaccccaattcattggcatgaagtacgtggct
gaaggaaaggaaaacccagagggggatgatgacaagatttacctcttctttagtgaaaca
gctatggagtacgactcctacaataagctggacgtgtcgagagtggcccgcgtctgtaag
ggggatatgggaggacagcggacactgcaaaggaagtggacatcgttcctaaaggctccc
ctggactgtcctgtccttcaaaccagacttccttacatcatacaggatgtgttcctcttc
tgcccaggcagctggacaacctgtgtgttctacggagtcttcactcctcagatggacgcg
ttgcagtactctgcagtgtgcacctacagtatacacagcatcagggaagtgttctctgaa
ggcaggttcaaaacgctgtacaacgacagatctgtttttaataaatgggtgacatactac
ggagatgtgcctgaccctcgtcctggagcttgtattaacaatgatgcaaggaagaaaatg
atttccacgtccttggacctgcctgataaaacccttctgtttgtgagagcaaagccactg
atggatgaagcagtgaaaccatcttctcagcaacccctgctggtgaagaaaggagctgcg
tttacacggatcgtagtggccagcactactgccctggatgggagcacccatcaggttatg
tttataggcacagcaagcggttcagtactgaaagcagtcaactatgacggaaagatggtg
ataatagaagaggtgcagctgtttaagcattcagagccagtgaagatactgcgcctctcc
aacaccatgggtcagctgtatgcaggctcaaacgaggcagcggtgcagatgtcgcttagc
gcatgcgaccattacatctcctgtatagactgtgtgctggccagagacccctactgcggc
tggaacctcaacactagtagctgcattgctataaacagcattgacccagatacacacagt
gaagtggttcagagtctgagagatggacatgctacacattgtcctgcagtcgagagcacc
aagaccattaaaaccttctacccgggtaacgtggtcaggctgccgtgccagccgggatca
aacctcgcccaagtgcagtggcgtgtaaatgatcacccagttgaaaactccaacatgtac
cacattcaacacaacagcctgttcatcctcaatgcctcggacagcgacgccggccactac
acctgcacctctgtagagtcctccaatggcaaagactacgtcattcaaactgttacgtat
gagctgagactggggaactacatggggcatccttcagtcctggcactggtgcaggaacag
ttgaacacccccttgatcctcagggctatggtcatcatcatatcactgttattagtggcg
cttttaatatggaacttctaccaagggaattgtcctgtcctgagatgcttcaataaagct
gtggaaagaccacagcctatgtctggctttcaggagccactgcaaatagtagacagaaat
aaagcagcatcagtaggatgcagcagtaacagtaataataatcataacagaacaactgaa
ctccccagtactggaagccagcataatggagacaacatcgtctag
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