Ixodes scapularis (black-legged tick): 8027094
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Entry
8027094 CDS
T01131
Name
(RefSeq) sodium channel protein para
KO
K04834
voltage-gated sodium channel type II alpha
Organism
isc
Ixodes scapularis (black-legged tick)
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
isc04040
]
8027094
Ion channels [BR:
isc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
8027094
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
SieB
GPHH
Motif
Other DBs
NCBI-GeneID:
8027094
NCBI-ProteinID:
XP_042144936
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MTMPSNEKIEQTETIFTTIYTFESFTKMMARGFILEPFTYLRDPWNWLDFVVISLAYVTM
FVNLGNLSALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALLG
LQIYMGVLTQKCVIIPPANLSDAEYASFIGNETNWAMDDDGMHPLCGNSTGAKQCQEGYM
CMQGIGENPDYGYTNFDTFGWAFLSAFRLMTQDYWESLYQMVLRSAGPWHMCFFVVIIFL
GSFYLVNLILAIVAMSYDELQKKAEEEAEEDRLIEEQMRAVKEARAELAAGGGRPHDTGS
GDGQLVKSPSEFSCRSYELFVGQDRGAEDPKDLRERASIRSAGVEGASLSLPGSPFNLRR
GSRGSQLSVSWRSNGRRLGDRKPLVLQTYRDAQEHLPYADDSNAVTPMSEDNGGAILLPM
YASLASRHSSYTSHSSRLSYTSHGAGDLFCRGAGAGGAAGALTKESQLRSRSRNLQGCYY
YEVSRAFLISSLSRLFSNFLSYIDGSHTGLQVEWDMPLDGEECLAVKKQPDNPFVEPSQR
QGLVDMKDVMVLNDIIEQAAGRQSKASERGVSIYYFPTEREEQERPKFKEKCMANCLKCI
DMFCVWDCCWYWIRIQEILGLIVFDPFMELFITLCIVVNTLFMAMDHHDMDKDFDNVLKK
GNYFFTATFAIEAAMKLMAMSPKNYFREGWNIFDFLIVALSLIELGLENVQGLSVLRSFR
LLRVFKLAKSWPTLNLLISIMGKTIGALGNLTFVLGIIIFIFAVMGMQLFGKNYEENKHK
FKENMVPRWNFVDFMHSFMIVFRVLCGEWIQSMWDCMWVSGWPCIPFFLATVVIGNLVVL
NLFLALLLSSFGASNLSQANPDSGDTKKLQEAIDRFHRASRWIKSNSMKVVKVCTFRRKP
RNQIGDQTTDIRGSNGAAGEELEGDPAGAGEVVLLDGRVPMRDKKPPHNNADLEVVVGDG
LEIAIQGDGKAVKMKLKNNSKPVMNSVWVGPMIEPKNKPPEKDNKEKEKEAQGNNKVYPS
KDEDTMSERSASSPKEKSLLVNKPSKDLSNTSLYLGNGGGGGEEEKKDASKEDLDAKEGE
EPPAEEAANPDTEDVDTDKLETATSDVIIPELPADCCPDCCYTRFAACCCYDESKPLWLK
YKIVRTKVYALVENKYFETVVVILILTSSLALALEDVNLKDRPLLKAVLTYMDKTFTVIF
FFEMLLKWVAFGFKKYFTNAWCWLDFVIVLVSFFNMAVSLMGYGRIPAFKTMRTLRALRP
LRAMSRLEGMRVVVNALVQAIPAIFNVLLVCLIFWLIFSIMGVQMLAGKFYRCVDGNGTR
LNSSFVPNRHSCETNNFTWDNPMINFDNVLNAYLALFQVATFKGWTDIMDNAIDSRGGKE
DQPEYEANIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKY
YNAMKKMGSKKPAKAIPRPRFKLQAMVFDLTTNKMFDMAIMIFIVLNMTVMAMDHYKQEK
LFESILERLNIFFIAVFTAECTLKIFALRWHYFKEPWNMFDFVVVILSILGTVLKDLIAT
YFVSPTLLRVVRVVKVGRVLRLVKGARGIRTLLFALAMSLPALFNICLLLFLVMFIYAIF
GMSFFMHVKHRYGVDENFNFETFGQSMILLFQMCTSAGWDGVLAAIMDERDCNRPTDDNE
GNCGKRGIAVAYLVSYLIISFLVIINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQ
QFDPKGTQYVTYSNLTNFVNALEEPLQIPKPNKYKLIALDIPICKGDMVYCVDILDALTR
DFFARKGHAIEEPVEITETVIHLDRPDYEPVSSTLWRQREEYCARVIQRAWRRYKGGGDV
GDDDPRGPAQQQTTAIVVESDGHVTRNGHRVVLHSRSPSVASRSTDV
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgactatgcccagcaacgaaaaaattgaacaaacagaaacaatattcaccacgatctac
acgttcgaatcctttacaaaaatgatggctcgaggatttattctcgaaccattcacatac
cttcgagatccgtggaattggttggattttgttgttatatctctagcatatgttacaatg
tttgttaatttggggaacctgagcgccttgcgtaccttccgcgtacttagagccttgaaa
acggtagctatagttccaggtctgaagaccatcgtaggagccgtgatagagtctgtgaag
aacctcagggacgtgatcattttgacaatgttctcactgtcggtatttgccttactgggg
ctgcaaatctacatgggtgtactcactcagaaatgcgtgatcattccaccggccaacctc
tccgatgcggaatatgcaagttttattggaaacgaaacaaactgggccatggatgatgat
ggaatgcatcctctgtgcggcaactcaactggtgcaaagcaatgtcaagagggatacatg
tgtatgcagggtataggagaaaacccggactatgggtacaccaatttcgacacctttggt
tgggcctttctatctgcgttcaggcttatgacccaagattattgggaatctttatatcaa
atggtgctacgatcggccggcccctggcacatgtgttttttcgtggtgattatcttcctg
ggctccttttaccttgtgaatttgattctggccattgtagccatgtcctacgacgaatta
caaaagaaagctgaagaagaggcggaggaggaccgccttattgaagaacaaatgcgggcc
gtgaaagaggcccgcgccgaactggcagccggcggtggccgcccccacgacacgggcagc
ggtgacggccagctggtcaagagcccgtccgagttctcgtgcaggtcgtacgaactcttt
gtcggtcaggaccggggcgctgaggatcccaaggacctccgggagcgggcgagcattagg
agcgccggggtagaaggagccagcctgagcctacccggctcgccctttaacctccgaagg
ggcagccgtggtagtcagctgagcgtgagctggcgcagtaacggacgccgcctgggcgat
cgcaagcccctcgtcctgcagacttacagggacgcgcaagaacacctgccgtacgccgac
gacagcaacgccgtcacgcccatgtccgaggacaatgggggtgccatcttgctgcccatg
tacgccagcctggcgtcgcgacattccagctacacctcccactcgtcgcgcctgtcgtac
acctcccacggagccggtgacctgttctgccggggcgccggcgctggtggcgctgcggga
gcactcaccaaggagagccagctgcgctcgcgctcgcgaaacctgcaaggatgctactac
tacgaggtctctcgggcctttcttatctcctctctctctcgactcttttccaactttctt
tcctatatagatggcagtcacaccggacttcaagttgaatgggacatgcctctggatgga
gaggaatgcctggctgtcaagaagcaaccagacaacccttttgtcgagccgtcgcagagg
caaggcctcgtagacatgaaagatgtgatggtgctgaacgacatcatcgagcaagccgcg
gggcgccagagcaaggccagcgaaagaggtgtgtccatctattatttccccacagaaagg
gaggagcaggagcggcccaagttcaaagagaagtgcatggccaattgcttgaagtgtata
gacatgttctgcgtgtgggactgctgttggtactggatcaggatccaggagatactcgga
ctcatcgtgtttgaccctttcatggagctcttcatcactctatgcatcgtggtcaacacg
ctctttatggccatggatcatcacgacatggacaaagactttgacaatgtcctcaaaaag
gggaattacttcttcaccgcgaccttcgcgatagaagctgctatgaagttgatggccatg
agtccaaaaaactactttcgcgaaggctggaacatcttcgatttcctcatcgtcgcgctc
tccctgatcgaactaggtttggaaaacgtccaaggattgtctgtactacgttcattccgt
ttgctacgtgtcttcaaattggccaagtcgtggcctaccctgaacctgctcatctctatc
atggggaaaaccatcggtgccctggggaacctgactttcgtcctaggaatcatcatcttc
atctttgccgtaatgggaatgcaactcttcgggaaaaactacgaggaaaacaagcacaag
ttcaaagagaacatggtgccgcggtggaacttcgtcgacttcatgcactcattcatgatt
gtgttccgggtgctgtgcggggaatggatccagtccatgtgggactgcatgtgggtctcc
ggatggccctgcatccctttcttcctcgccaccgtcgtcatcggcaaccttgtggtgctc
aaccttttcttggccttgctactgtcctcgtttggggcatccaacctgtcccaagcgaac
ccagacagtggagacacaaagaagcttcaagaagccatcgaccggttccatcgagccagc
cggtggatcaagtccaattccatgaaagtggtcaaggtctgcaccttccggcgcaaaccg
cgcaaccagatcggggaccagacgacggacatccgtggaagcaacggcgcggcaggcgaa
gagctggaaggtgacccggccggcgccggggaggtggtcctcctcgacggccgggttccg
atgcgagacaaaaagcccccgcacaacaacgccgacctcgaggttgtggtgggggacggc
ctcgagatcgccattcaaggtgatggcaaggccgttaaaatgaaattgaaaaacaactcc
aagcctgtgatgaactccgtctgggttggtcctatgatcgagcccaagaacaagccgccc
gaaaaagataacaaagaaaaggagaaagaggcgcaagggaacaataaggtgtacccgagt
aaggacgaggacacgatgagcgagaggtctgcctccagccccaaggagaaaagcctgctg
gtgaacaagccgtccaaagaccttagcaacacctccctctacctggggaacgggggagga
gggggcgaggaggagaagaaggatgccagcaaggaagacctcgacgccaaagaaggcgaa
gaaccaccggccgaggaagcggccaaccccgacaccgaagacgtggacacggacaagctg
gagacggccacttcggacgtgataattccggaactacccgccgactgctgtccggactgc
tgttacacccggttcgcggcctgctgctgctacgacgaaagcaagcccctctggctcaag
tataagatcgtgcgaacaaaggtgtacgccctcgtcgagaacaagtacttcgagacggtc
gtggtcatcctcattctgaccagcagcctggcactggccctggaggatgtgaacctcaag
gaccgtcctctactaaaggccgtgctcacctacatggacaagaccttcacggtcatcttt
ttctttgagatgcttctcaaatgggtggcctttggcttcaagaaatacttcacaaatgcc
tggtgctggctagactttgtcatcgtgctggtgtccttctttaacatggccgtatctctg
atgggctacggacgcatccctgcctttaaaaccatgcgcacattgcgtgcgctcagacca
ctgagggcgatgtcgcgcctggagggcatgcgcgttgtagtcaacgccctcgtccaagcc
atcccggccatcttcaacgtgctgctggtgtgcctcatcttctggctcatcttctccatc
atgggggtccagatgcttgcgggaaagttctaccgctgcgtcgacggcaacggcacgcga
ctcaacagctccttcgtgcccaaccgccactcgtgcgagaccaacaacttcacctgggac
aaccccatgatcaacttcgacaacgtactcaacgcttacctcgccctcttccaagtggca
acgttcaaaggctggactgacatcatggacaacgccattgactcaagaggagggaaagag
gaccagccggaatacgaagcaaacatctacatgtacctctacttcgtgttctttatcatc
ttcggctccttctttacactaaatctattcatcggtgtgattatcgacaatttcaacgaa
caaaaaaagaaggccggaggatctctagaaatgttcatgacggaagatcagaaaaagtac
tacaacgccatgaagaaaatgggctctaaaaagccggccaaggccatcccaaggccacga
ttcaaacttcaggcgatggtgttcgacctgaccaccaacaagatgttcgacatggccatt
atgattttcatcgttctcaacatgaccgtcatggcaatggaccactacaagcaggagaag
ctgttcgagtccatcctagaacggctcaacatattctttattgccgtgtttacggccgag
tgcaccctcaagattttcgccctgcgttggcactactttaaggagccatggaacatgttc
gactttgtagttgtcattctctcaattctaggcacggtgctcaaggacctgatagcaacg
tacttcgtgtcacccacgctgctgcgtgtggtgcgcgtcgtcaaggtgggccgcgtgctg
cggctggtcaagggggcacggggcatccgaacgctcctatttgccctcgccatgtcgctg
cccgcgctcttcaacatctgcctgttgctgttcctggtgatgttcatctacgccatcttc
ggcatgtccttcttcatgcacgtcaagcaccgctacggcgtcgacgagaacttcaacttt
gagacgttcggccaatccatgatcctgctgttccagatgtgcacgtccgcaggctgggac
ggcgtcttagctgccatcatggacgagagggattgcaatcgccccaccgacgacaacgag
ggtaactgcggaaaacggggcatagccgtggcttacctcgtctcctacctcatcatcagc
ttcctcgtcatcatcaacatgtacatcgccgtcatcctcgagaattacagtcaggccacc
gaagacgttcaagagggactcacggacgacgattacgacatgtactacgagatctggcag
cagttcgaccccaagggcacccagtacgtcacgtactccaacctgaccaacttcgtcaac
gccctggaagagcccctccagatccccaagcccaacaagtacaagctcatcgccctggac
atccccatttgcaagggggacatggtgtactgcgtggacatcttagacgcgctcaccaga
gacttctttgcccgaaagggccatgccatcgaggagcccgtcgagatcaccgagacggtc
atccacctagacaggccagactacgagcctgtcagttcgacgctgtggcgccagcgcgaa
gagtactgtgcccgtgtcattcaacgtgcctggcgacgctacaagggcggcggcgacgtg
ggtgacgatgacccccgtggtcccgcccagcaacagacgaccgccatcgttgtcgagagt
gacggtcacgtgactaggaacgggcatcgagtggtgctgcactcgcgttcgccgagcgtc
gccagccgctccacagacgtgtga
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integrated database retrieval system
