Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955873
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Entry
101955873 CDS
T10664
Symbol
Smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082
ATP-dependent chromatin remodeling
iti04714
Thermogenesis
iti05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101955873 (Smarcd1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101955873 (Smarcd1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101955873 (Smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iti03021
]
101955873 (Smarcd1)
03036 Chromosome and associated proteins [BR:
iti03036
]
101955873 (Smarcd1)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101955873 (Smarcd1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101955873 (Smarcd1)
PBAF complex
101955873 (Smarcd1)
GBAF(ncBAF) complex
101955873 (Smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101955873
NCBI-ProteinID:
XP_040136594
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFER
KLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRL
LEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRP
GDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHERE
FVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVE
VDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDW
LQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtcccgcaagagacctgcacctcagcagatccagcaggtccaacagcaggcg
gtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaaattctacctcaa
aggattcgtgaactggttccagaatcccaggcctatatggatcttttggcttttgaaagg
aaactggaccagactatcatgaggaaacggctagatatccaggaggccttgaaacgtccc
atcaagcaaaaacggaagctgcgaattttcatttctaacactttcaatccggctaagtca
gatgccgaggatggggaagggacggtggcttcctgggagcttcgggtagaaggacggctc
ctggaggattcagccttgtccaaatatgatgccacaaaacaaaagaggaaattttcttcc
ttttttaagtccttagtgatcgaattggacaaagacttgtatgggccagacaaccatctg
gtagaatggcacaggaccgccactacccaggagaccgatggcttccaggtgaagcgacca
ggagatgtgaatgtacggtgtactgtcctactgatgctggattatcagcctcctcagttt
aaattagaccctcgtttggctcggctccttggcattcacacccagactcgtccagtgatc
attcaagcactatggcaatatattaagacacataagctccaagatcctcatgagcgggag
tttgtcatctgtgacaagtacctccagcagatctttgagtctcagcgtatgaagttttca
gagatccctcaaaggctgcatgccttgcttatgccaccagaacccattatcattaatcac
gtcatcagtgttgatccaaatgatcagaaaaagacagcttgttatgacattgatgtggaa
gtggatgataccttgaagactcagatgaattctttcctgctgtccactgctagtcaacag
gagattgctactctagacaacaagatccacgaaacaatagaaactatcaaccagctgaag
acccagcgggagttcatgctgagctttgccagagaccctcagggtttcatcaatgattgg
cttcagtcccagtgccgggacctcaagaccatgactgatgtggtgggtaacccagaggag
gagcgccgagctgagttctatttccagccttgggctcaggaggccgtgtgccgatacttt
tactccaaggtgcagcagagacgacaagaattagagcaagccctgggaatccggaataca
tag
DBGET
integrated database retrieval system
