Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956753
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Entry
101956753 CDS
T10664
Symbol
Capn2
Name
(RefSeq) calpain-2 catalytic subunit
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04141
Protein processing in endoplasmic reticulum
iti04210
Apoptosis
iti04217
Necroptosis
iti04218
Cellular senescence
iti04510
Focal adhesion
iti05010
Alzheimer disease
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101956753 (Capn2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101956753 (Capn2)
04217 Necroptosis
101956753 (Capn2)
04218 Cellular senescence
101956753 (Capn2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
101956753 (Capn2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101956753 (Capn2)
05022 Pathways of neurodegeneration - multiple diseases
101956753 (Capn2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101956753 (Capn2)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
101956753 (Capn2)
Peptidases and inhibitors [BR:
iti01002
]
Cysteine peptidases
Family C2: calpain family
101956753 (Capn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
OST-HTH
Motif
Other DBs
NCBI-GeneID:
101956753
NCBI-ProteinID:
XP_005326570
UniProt:
I3MDF9
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MAGIAAKLAKDREAAEGLGSHERAIKYLNQDYEELRNQCLEAGALFQDPSFPALPSSLGF
KELGPYSSKTRGIEWKRPTEICDEPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEEI
LARVVPLDQSFQENYAGIFRFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSAL
LEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELKKAPPNLFRIIQKALQKGSLLGC
SIDITSAADSEAITYQKLVKGHAYSVTGAEEVESAGSLQKLIRIRNPWGEVEWTGKWNDN
CPNWNTVDPEVRERLTRQHEDGEFWMSLSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTK
MDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQR
KMGEDMHTIGFGIYEVPEELRGQTNIHLSKKFFLTTRARERSDTFINLREVLNRFKLPPG
EYILVPSTFEPNKDGDFCVRVFSEKKADYQVVDDEIEANLEEIDVSEEDIDDGFRRLFAQ
LAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYIL
WTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFD
NFVRCLVRLETLFKIFKQLDPENTGTIELDLISWLCFSVL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtatcgcagccaagctggccaaggaccgggaggcggccgaggggctgggctcg
cacgagagagccatcaagtacctcaaccaggactacgaggagctgcggaaccagtgcctg
gaggccggggcgctctttcaggacccctccttccctgctttgccgtcgtccctgggcttc
aaggagctgggaccctactccagcaaaactcggggcatcgaatggaagcgacccacggag
atctgcgatgaaccccaatttattgttggtggagccacccgcacagacatctgccaagga
gccctgggtgactgctggctgctggctgccatcgcctcccttaccttgaatgaagaaatc
ctggctcgagtcgtccccctagaccagagcttccaggagaactatgcagggatcttccgc
ttccagttctggcagtatggcgagtgggtggaggtggtggtggacgacaggctgcccacc
aaggatggagagctgctctttgtgcattcagctgaggggagcgagttctggagtgccctg
ctggagaaagcctatgccaagatcaacgggtgctatgaagcgctctctggaggtgccacc
accgagggctttgaggacttcacaggaggcattgctgaatggtatgagttaaagaaggcc
cctcccaacctgttcaggatcatccagaaggctctgcagaagggttccctccttggatgc
tctattgatatcaccagcgccgcggattccgaggccatcacatatcagaagctggtgaag
ggacacgcgtactcggtcaccggagccgaagaggttgaaagtgcaggaagcctacagaaa
ctgatccgaatccgaaatccctggggagaagtggagtggaccgggaagtggaatgacaac
tgcccaaactggaacactgtagacccagaggtgagagaaaggctcaccagacagcatgag
gacggggagttctggatgtctctcagcgacttcctgaggcactattcccgcttggagatc
tgcaacctgacccccgacacactcaccagtgattcctacaagaagtggaaactcaccaag
atggatgggaactggaggcggggctccactgcaggaggctgcaggaattacccaaacact
ttctggatgaaccctcagtatctgatcaagctagaggaggaggatgaggatgaggaggat
ggggagagcggctgtaccttcctggtgggcctcatccagaagcatcggcggcggcagagg
aaaatgggcgaggacatgcacaccattggctttggcatctacgaggttccggaggagtta
agagggcagaccaacatccacctcagcaaaaaattcttcctgaccactcgagccagggag
cggtcagacacgttcatcaacctccgggaggttctcaaccgcttcaagctgcccccagga
gagtacatcctcgtgccctccacctttgaacccaacaaggacggggatttctgcgtcagg
gtgttttccgagaagaaagctgactaccaagttgtcgatgacgaaattgaggccaacctt
gaagagatcgatgtcagcgaggaggacatcgatgatggattcaggaggctgtttgctcag
ttggcaggggaggatgcagagatctctgcctttgaactccagaccatcttgaggagagtt
ctggcaaagcgtcaagatatcaagtcagatggcttcagcattgagacttgcaaaatcatg
gtggacatgctggattcggatgggagcggcaagctggggctgaaggagttctacattctc
tggacaaagattcagaaataccaaaaaatttaccgggaaatcgatgttgacaggtctggt
accatgaattcctacgagatgaggaaagcactagaagaagcaggtttcaagatgccctgt
caacttcaccaagtgatcgttgctcggtttgctgatgatcagctcatcatcgattttgat
aattttgtacggtgtttggttcggctggaaacgctattcaagatctttaagcagctggat
cccgaaaatactggaacgatagagctcgaccttatttcttggctctgtttttcagtactt
tga
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