KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960335
Entry
101960335         CDS       T10664                                 
Symbol
Sf3a3
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101960335 (Sf3a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:iti03041]
    101960335 (Sf3a3)
Spliceosome [BR:iti03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101960335 (Sf3a3)
 Complex B
    101960335 (Sf3a3)
 Complex C
   U2 SnRNP specific factors
    101960335 (Sf3a3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 101960335
NCBI-ProteinID: XP_005317899
UniProt: I3LZ25
LinkDB
Position
Unknown
AA seq 501 aa
METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL
YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNA
EYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQTEFEKKWDNGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSL
FAKNPKSKGTKRDTERNKDIAFLEAQIYEYVEILGEQRQLTHENVQRKQARTGEEREEEE
EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagacaattctggagcagcagcggcgataccatgaagagaaagaacggctcatggac
gtcatggccaaagagatgctcactaagaagtccacgctccgggaccagatcaactccgac
caccgcacccgggccatgcaagatagatatatggaggtcagtgggaacctgagggatttg
tatgatgataaagatggattacgaaaggaggagcttaatgcaatttcaggacccaatgag
tttgctgaattctataacagactcaagcaaataaaagaattccatcggaagcacccaaat
gagatctgtgtgcctatgtctgtggaatttgaggagctcctgaaagctcgtgagaatcca
agtgaagaggcacaaaacctggtagagttcacagatgaagagggatatggacggtacctt
gacctccatgactgttacctcaagtacattaatctgaaggcatctgagaagctggattat
atcacgtacctgtccatctttgaccagttatttgacattcctaaagaaaggaagaatgca
gagtataagagatacctagagatgctgcttgagtaccttcaggattacacagatagagtg
aaaccccttcaagatcagaacgaactttttgggaagattcagactgagtttgagaagaag
tgggataacggaacgtttcctggatggccgaaagagacaagcagtgccctgacccatgct
ggagcccatcttgacctctctgcattttcctcctgggaggagttggcttccctgggtctg
gacagattgaagtctgcactcttagctttaggcctgaaatgtggtgggaccctagaagag
cgagcccagaggctattcagcaccaaaggaaagtccctggaatctcttgacacctctctg
tttgcaaaaaatccaaaatcaaagggcactaagagagacactgagaggaacaaagacatt
gctttcctggaagcccagatttatgaatacgtggagattcttggagaacagcgacaactt
actcatgaaaatgtacaacgcaagcaagccaggactggagaagagcgagaagaggaggag
gaagagcagattagtgagagtgaaagtgaagatgaagagaatgagatcatttacaacccc
aaaaacctgcccctcggctgggatggcaaacctattccctactggctgtataagcttcat
ggcctgaatatcaactacaactgtgagatttgtggaaactacacctaccgagggcctaag
gccttccagcggcactttgctgaatggcgtcatgcccatggcatgaggtgtttgggcatc
ccaaacactgcccactttgctaatgtgacacagattgaagatgctgtctccttgtgggcc
aagctgaaacttcagaaggcttcagaaagatggcagcctgacactgaggaagaatatgaa
gactctagtgggaatgttgtgaataagaagacatatgaggatctgaaaagacaaggactg
ctctag

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