Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960477
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Entry
101960477 CDS
T10664
Symbol
Setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00310
Lysine degradation
iti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101960477 (Setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101960477 (Setd1a)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
101960477 (Setd1a)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101960477 (Setd1a)
HMT complexes
COMPASS/SET1 complex
101960477 (Setd1a)
COMPASS/SET1 complex (yeast)
101960477 (Setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
101960477
NCBI-ProteinID:
XP_021581191
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDGIHFSVNDSKYIPVEDL
QDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLNDNVRETFLKDMCRKYGEV
EEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGNIIHAQLDIKGQQRMKYY
ELIVNGSYTPQTVPTGGKALSEKFQGSGAATETTESRRRSSSDTTAYPAGTAVVGTPGNG
TPCSQDTSFSSSRQDTPSSFGQFTPQSSQGTPYTSRGSTPYSQDSAYSSSTTSTSFKPRR
SENSYQDSFSRRHFSASSAPTTASTAISATTAATASSSSSSSSLSSSSSSSSSSSSSQFR
GSDSNYPAYYESWNRYQRHASYPPRRATREEPPGAPFTENTAERFPPSYTSYLPPEPSRA
TDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEARTSPRPASPARSCSPAPETTNESV
PFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSTGPGARDTGSEVPSGSGHGPCT
PPPAPANFEDVAPTGSGEPGAARESPKANGQNQASPCSSGEDMEISDDDRGGSPPPAPTP
PQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPPPPHIYDFV
NSLELMDRLGAQWGGMPMSFQMQTQMLTRLHQLRQGKGLTAASAGPPGGAFGEAFLPFPP
PQEAAYGLPYALYTQGQESRGAYSREAYHLPLPMAAEPLPSSSVSGEEARLPPREEAELA
EGKALPSAGTVGRVLATLVQEMKSIMQRDLNRKMVENVAFGAFDQWWESKEEKAKPFQNA
AKQQAKEEDKEKTKLKEPGMLSLVDWAKSGGTTGIEAFAFGSGLRGALRLPSFKVKRKEP
SEISEASEEKRPRPSTPAEEDEDDPEREKEAGEPGRPGSKPPKRDEDRGKTQGKHRKSFA
LDSEGEEASQESSSDKDEEDDEEDEEDEDREEAVDTAKKETEASDGEDEESDSSSKCSLY
ADSDGENGSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEEEEEEEQPAVISSASSP
PGEVPAPLPAPVEEPEPERVAGSPVTPLSEQEKSPARPAGPTEEPPPSVPQPPPEPPAGP
PAPTSRSDQRPSSPIPLLPPPKKRRKTVSFSAVEEVPAPEPPPAAPPQAKSPGPISRKVP
RGVERTIRNLPLDHASLVKSWPEEVSRGGRSRAGGRGRSTEEEEGEPGTEVDLAVLADLA
LTPARRGLATLPTGDDSEATETSDEADRPSPLLSHILLEHNYALAIKPTPSTPAPRPPEP
VPAPAALFSSPVDEVLEAPEVVVAEAEEPKQQQLQQQPEDGEEEEEEEEEESESSESSSS
SSSSDGEGAVRRRSLRSHTRRRRPPLPPPPPPPPSFEPRSEFEQMTILYDIWNSGLDLED
MSYLRLTYERLLQQTSGADWLNDTHWVHHTITNLSTPKRKRRPQDGPREHQTGSARSEGY
YPISKKEKDKYLDVCPVSARQLEGVDTQGTNRVLSERRSEQRRLLSAIGTSAIMDSDLLK
LNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGI
GSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEE
ITYDYKFPLEDNKIPCLCGTESCRGSLN
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaaggtgggggagatgggcagaaagccccgagcttccagtggcggaactac
aagctcatcgtggatcctgccttggaccctgccttgcgcaggccttctcagaaggtgtac
cgctatgacggaatccacttcagtgtcaacgactcaaagtatataccagtcgaagacctc
caagacccccgttgccatgtcaggtccaaaaacagagacttttccctcccagtccctaag
tttaagctggatgagttctatattggacagattccacttaaggaagtgacttttgcaagg
ctgaatgacaatgtgcgggaaaccttcttaaaggatatgtgccgaaagtatggtgaggta
gaagaggtagagatccttcttcacccccgtactcgaaagcacctgggcctggcccgtgtg
cttttcaccagcactcggggtgccaaggaaacagtcaaaaatctccaccttacctccgtc
atgggcaatatcatccatgctcagcttgacatcaaaggacaacaacgaatgaagtactat
gaattgattgttaatggctcctatacccctcagactgtgcccactgggggcaaggccctg
agcgagaagttccagggatctggtgcagccactgaaacgactgagtcccgccgccgctct
tcctctgacacaactgcctacccagcaggcactgctgtggtgggcacccctggcaatggc
accccttgctcccaggacacaagcttctccagcagccgacaagacaccccatcttccttt
ggccagttcacccctcagtcctcccaaggaactccctacacgtctcggggaagcacccct
tactctcaggactctgcctactccagcagcaccacttcaacctccttcaaaccccggcgg
tcagagaacagctaccaagattccttttcccgccgccatttttctgcatcttctgcccca
acaaccgcttctacagccatctcagctaccactgcagccaccgcttcatcctcctcttct
tcttcctcattgtcctcatcttcctcatcatcgtcttcttcctcgtcctctcaatttcgt
ggttctgactcaaactacccagcatattatgaaagctggaatcgctatcagcgccatgct
tcctacccaccacgccgggcaactcgggaggagcccccgggggccccttttacagaaaat
accgctgagcgcttcccaccttcctacacctcctacttgccccctgagcccagccgggcc
actgaccaagactaccggcctcctgcctcagaggccccaccccctgagcctccagaacct
ggtggaggtgggggtggtggggggcctagccctgagagagaagaagctcggacctccccc
cgcccagcctcacctgcccgttcctgctccccagccccagagaccaccaatgagagtgtg
cccttcgcccagcacagcagcctggattcccgcattgaaatgctgctgaaggagcagcgc
tccaaattttctttcctggcctctgacacagaggaggaggaagagaacagcagtacaggc
cctggggctagagacacagggagcgaggttccttctgggtcaggtcatgggccctgcaca
ccccctccggccccagctaattttgaagatgtggcacctacaggaagtggggaaccaggg
gctgcccgagagtctcccaaggccaatggacagaaccaggcttctccatgctcttctgga
gaggacatggagatctccgatgatgacaggggtggttcaccccctccggccccaacaccc
cctcagcagcctccgcccccacctcctccacctcctcctccacctccttacctggcttcc
cttccccttggctatcctccccaccaacctgcctacctcctcccaccccgacctgatggg
ccaccacccccagagtaccccccacctccaccaccaccaccccatatctatgactttgtg
aattccctggaactcatggatcgacttggggctcagtggggagggatgcctatgtccttc
cagatgcagacccagatgttaactcggcttcatcagctgcggcagggcaagggattgact
gctgcctctgctggccctcctggtggggcctttggggaggcctttctcccctttccgccc
ccgcaagaggcagcctatggcttgccctatgctctatatacccaagggcaagaaagccgt
ggggcatactctcgggaggcctaccacctgcctttgcccatggcagccgagcccctgccc
tcctcctcagtctcgggtgaagaggcccggctgcctcctagggaggaagcagagctggca
gaaggcaaggccctaccatcagcgggcactgtgggccgtgtgctggccaccctagtccaa
gaaatgaaaagcatcatgcagcgagacctcaaccgcaagatggtggaaaatgtggccttt
ggagcctttgaccagtggtgggaaagcaaggaagagaaggccaagccattccagaatgca
gccaaacagcaagccaaggaagaggataaagagaagacaaagctcaaagagccaggcatg
ctgtcccttgtagactgggccaagagtgggggtaccacaggcatcgaggccttcgccttt
gggtcaggtctgcgaggggccctacggctgccttcattcaaggtaaagcggaaagagcca
tcagaaatttcagaggccagtgaagaaaagaggccacgaccctccactcctgctgaagaa
gatgaagatgaccccgagcgagagaaggaagctggagaaccaggacgtccagggtccaag
cccccaaagcgagacgaagatcgaggcaagacccaaggcaagcaccgaaagtcctttgct
ctggatagtgaaggagaagaggcatcccaggagtcttcctcagataaggatgaggaagat
gatgaggaagatgaagaagatgaagatcgagaagaagctgtggatactgctaagaaagag
acagaagcatcagatggcgaggatgaggaaagcgattcgtcctcgaaatgttctctgtat
gctgactcagatggtgaaaatggtagcacgtcagactcagagagcagcagttcctccagc
tcttcatcttcctcatcttcttcctcatcatcctcatcatcctcttcatcatcggaatca
tcctcagaagaggaagaggaagaagagcagccagcagtcatttcctcagcgtcttcgccc
cccggagaagtcccagcacctctcccagcacctgttgaggagcccgagccagagagagtt
gcaggctccccagttacacctctctctgaacaagagaagtctccagcaaggcctgcaggt
cctacagaggaaccacctcccagtgtgccccagcctcccccagagccaccagctgggccc
ccagccccaacctcccgttctgaccagcgaccctcttctcctattccccttcttccccca
cctaagaaacgccggaaaactgtctccttctctgctgtggaggaggtgcctgccccagag
cctcccccagctgccccaccacaagccaagtctcctggcccgatctctcgcaaagtcccc
cggggcgtagagcggaccattcgcaacctgcccctggaccatgcatctctggtcaagagt
tggcccgaggaggtgtcccgagggggtcggagccgggctggaggccgaggtcgctccact
gaggaagaagagggtgagccagggacagaagtggacctggcagtactagctgacctggcc
ttgaccccagcccggcgtgggctggccaccctgcctactggcgacgattcagaggccaca
gagacctcagatgaggcagaccgccccagtcccctgctcagccacatcctcctggagcac
aactatgccctggccatcaagcccacaccttccacaccggccccccggcctccggagcca
gttcctgcccctgcagctctcttcagttccccagtggatgaggtcctagaggcccctgag
gtggtggtggctgaggcagaggagccaaagcagcagcaactgcaacagcagccagaggat
ggggaggaggaggaggaggaagaagaggaggaatccgagtcctcagagagcagcagcagc
agcagtagcagtgatggtgagggggctgtccgacggcgcagcctccgctctcacacccgg
cgccggagaccaccgctcccacccccacctccaccacccccctcctttgagccccgcagc
gagtttgagcagatgaccattctgtatgacatttggaactcgggcctagacttagaagac
atgagctacctgcggctcacatatgagcggctactgcaacagaccagcggagctgactgg
cttaacgacacccactgggtccatcacacaatcaccaacctgagcactccaaagcgcaag
cgccggccccaggatgggccccgagagcaccagacaggctcggcacgcagtgaaggttat
taccccatcagcaagaaggagaaggacaaatacctggatgtgtgccccgtctcagcccgg
cagctggaaggagtggacactcaggggactaaccgtgtgctttcggagcgccggtctgag
cagcggcggttgctaagtgccattggcacctcagccatcatggatagtgatctgctaaag
ttaaaccagctcaagttccgaaagaagaaacttcgatttggccggagccggatccacgag
tggggtctgtttgccatggaacccattgcagctgatgagatggtcattgaatacgtgggt
cagaacatccgccagatggtggctgacatgcgggagaagcgctatgtacaggagggtatc
ggcagcagctacctgttccgggtggaccacgacaccatcattgatgctaccaagtgtggc
aacctggcgaggttcatcaaccactgctgcacgcccaactgctatgccaaggtgatcacc
attgagtcacagaagaagatcgtgatttactccaagcagcccattggcgtggatgaggag
atcacctatgactataagttcccgctggaggacaacaagatcccgtgtctatgcggcact
gagagctgccgtggctccctcaactga
DBGET
integrated database retrieval system
