KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971629
Entry
101971629         CDS       T10664                                 
Name
(RefSeq) core histone macro-H2A.1 isoform X1
  KO
K11251  histone H2A
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082  ATP-dependent chromatin remodeling
iti04217  Necroptosis
iti04613  Neutrophil extracellular trap formation
iti05034  Alcoholism
iti05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101971629
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101971629
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    101971629
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    101971629
  09165 Substance dependence
   05034 Alcoholism
    101971629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101971629
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101971629
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    101971629
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101971629
SSDB
Motif
Pfam: Macro Histone_H2A_C Histone CBFD_NFYB_HMF DUF1764 Clp_N
Other DBs
NCBI-GeneID: 101971629
NCBI-ProteinID: XP_005333246
LinkDB
Position
Unknown
AA seq 372 aa
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
DGFTILSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISNYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcgagccgtggtgggaagaagaagtccaccaagacctccaggtccgccaaggcaggc
gtcatctttcctgtggggcggatgctgcggtacatcaagaaaggccaccccaagtacagg
attggagtgggggcacccgtgtacatggctgccgtcttggaatacctgacagcggagatc
ttggaactggctggcaatgcagcaagagacaacaagaagggacgggtcacaccccggcac
atcctgctggctgtggccaacgacgaagagctaaatcagctgctaaaaggagtcaccata
gccagtggcggggtgttaccgaacatccaccctgagttgctagcaaagaagcgaggatcc
aaaggaaagttggaagccatcatcaccccacccccagccaaaaaggccaagtctccatcc
cagaagaagcctgtgtctaagaaggcaggaggcaagaaaggggcccggaaatccaagaag
aagcagggagaagtcagcaaggcagccagtgctgacagcacgacagagggcacgccggcc
gacggcttcaccatcctctctaccaagagcctcttccttggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaacacgctggagaagaagggtggcaaggag
tttgtggaagctgttttggaacttcggaaaaagaacgggcccttggaagtagctggagct
gctgtcagtgcaggccatggcctgcctgccaagtttgtgatccactgtaatagtccagtc
tggggtgcagacaagtgtgaagaacttctggaaaaaaccgtgaaaaactgcttggccctg
gctgatgataagaagctgaaatctattgcatttccatctattggcagcggcaggaacggg
ttcccgaagcagacggcagcccagctgattctgaaggccatctccaattacttcgtgtcc
accatgtcctcctccatcaaaacggtgtacttcgtgctttttgacagtgagagtataggc
atctacgtgcaggaaatggccaagctggatgccaactag

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