Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972015
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Entry
101972015 CDS
T10664
Symbol
Sec24b
Name
(RefSeq) protein transport protein Sec24B
KO
K14007
protein transport protein SEC24
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101972015 (Sec24b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101972015 (Sec24b)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101972015 (Sec24b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
101972015
NCBI-ProteinID:
XP_040149058
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MAKPEVSEAQISEIVTGSANADLGLRRGGVGALGKGQPTYRVNPGYPAWARASWPERPLG
WESRRAAQAAECVVCGRLMQSSSRVDCPAHSQMQVPSGYGLHHPNYIGPSGHFPQGPGKM
TSLPLESQRGDYYSGLYTVPTQNVVTPCTANQSGAQQMYGRGPPAPHVVGSTPGSFQGAA
SSASHLYTSASQPYSSFVNHYNSPAMYSVNSSVASQGFPSTCGHYAMSTISNAVYPSVSY
PSLPAGDPYGQMFTSQNAPTVRPVKDNSFPGQNTVVSYPSPLPPPPSQQQQQQQQQQQQQ
QQQQQSLSGYNTLSWSAPGLPSTPDSLIRNHTGSLAPTNNNPTNTVADSLSCAVMQNVQP
RKSSPVVSTVLSGASSTRMPSAAKHPTEPVAPVTQPSELIQQKGMQYGEYVNNQASSAPT
PLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDVHSSSASSPAPDPA
PEPDPAPAPAPAPAPAAPQPSKMAKPFGYGYPILQPGYQNAAAPLNSGVHPSSQGYSGFQ
QYPQQYPGVNQLSSGLGGLSLQSSPQPESLRPINLTQERNVLPMTPVWPPVPNLNLELKK
LNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYI
NPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYML
RPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNL
QEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGP
ALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLA
LDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHHTHNPSQAEKLQKDLKR
YLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTD
TSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVS
SSLSDARDALVNAVVDSLSAYGSTVSNLQHSALIAPGSLKLFPLYVLALLKQKAFRTGTS
TRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAIHVNDRVVPQPPLQKLSAEK
LTREGAFLMDCGSVFYIWIGKGCDNNFIEDVLGYPNFASIPQKMTHLPELDTLSSERTRS
FITWLKDGRPLSAVLHVVKDESPAKTEFFQHLIEDRTEAAFSYYEFLLHVQQQICK
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctgaggtatctgaagcccagatcagtgagatagtgactgggtctgccaac
gctgatctgggcctgcgccgcgggggagtcggtgccctgggaaaggggcagcccacgtac
cgagtgaacccgggctacccagcctgggcgcgggcgagttggcctgagcgaccccttggc
tgggagagccggcgagcagcccaggccgcagagtgcgtggtctgtggaaggctgatgcag
tcatcaagccgggtggattgtccagcacacagtcaaatgcaggttccatctgggtatgga
ttacatcatccaaactatattggcccctcaggacatttccctcaaggacctggaaaaatg
acctcattgccattggagagccagcgtggtgattactactctggtctctatacagtacca
acacaaaatgtggtgactccttgcacagcaaaccaatcaggagcacagcagatgtatggc
aggggtcctcctgcccctcacgttgtgggatctactccaggatctttccaaggtgctgca
tcatcagcatcccatttgtatacgagtgcctcccagccatattcctcttttgtgaatcac
tacaatagtccagccatgtactctgtcaactcttctgttgcttctcagggatttccctct
acttgtggtcattacgctatgtcaactatttctaatgctgtatatcctagtgtttcatat
ccttctctgcctgctggtgatccatatgggcaaatgtttacctcacaaaatgctccgact
gtcaggccagttaaagataattcatttcctggccaaaatacagttgtcagctacccatca
ccacttccacctccaccgtcacagcagcagcagcagcaacagcagcagcaacagcaacag
caacagcagcagcaaagtctttcaggatataataccctatcatggtcagctccgggcctt
ccatcaactccagacagtctcatccgaaaccacacggggtccctggctccaaccaacaac
aacccgacaaatactgttgcagattctctatcctgtgctgttatgcaaaatgtccagcct
cgaaaatccagcccagtagtatccactgtattgtcaggagcctcatcaacaagaatgcct
tctgctgcaaagcacccaacagaacctgtggccccagttactcagccatcagagctaata
cagcagaaaggcatgcagtatggtgaatatgttaataatcaagctagctccgcaccaact
cccttgtcatcaacttccgatgatgaggaagaggaggaggaggatgaggaagcaggtgtt
gacagctcttctaccacaagcagtgcttctccaatgcccaacagttatgatgccctggaa
ggaggcagctacccggatgtgcattcttcctcagccagcagccctgctcctgatccagcc
cctgagcctgatcctgctccagctccagcgccagcaccagctcctgctgctcctcaacct
tcaaaaatggctaagccttttggctatggttacccaattcttcagcctggttatcagaat
gctgcagcaccacttaattctggagtacatcccagtagccaagggtattctggatttcag
cagtatcctcaacagtatcctggtgtcaaccagctgtcctctggtctaggaggattgagt
cttcagagttctccacaaccagaaagcctgagacctataaacctcactcaggagaggaat
gttttacccatgactcccgtttggcctcctgtgcctaacttgaacttagaactcaaaaag
ctaaactgtagcccagattcatttcggtgtactttgacaaatattccacagactcaggct
ttactgaataaagctaagcttcccttaggattgttgttacatcccttcagagacctaacg
caattaccagtaataacatcaaataccattgtgaggtgccgatcttgtcgaacatacatc
aacccctttgtgtccttcattgatcaacgtagatggaaatgcaacttgtgctatagagtt
aatgatgttcctgaagaatttatgtataaccctcttactcgatcttatggagaacctcat
aaacgaccagaagttcagaattcaactgtggagttcattgcttcttcagattacatgctt
cgtcctcctcaacctgcagtttacttgtttgttttagatgtatctcataatgcagtggaa
gctgggtatttgacaattttgtgccagtcactattagaaaacttagacaagcttcctgga
gattcacggacaagaataggattcatgacctttgacagcactattcatttctataattta
caggaaggattatcacagcctcaaatgttgattgtatctgatattgatgatgtttttcta
cctactccagatagtttacttgtgaatctctatgaaagtaaagagcttataaaagactta
ttgaatgcattaccaaatatgttcaccaatacaagagaaacacacagtgcccttggtcct
gcgcttcaggctgcctttaaattaatgtctccaacaggtggccgtgtgtctgtatttcag
acacagttaccttccttgggtgcagggcttctgcagtccagagaagatcctaatcaaagg
tcaagtacaaaggtggtacaacatcttggccctgcaactgatttttataagaaacttgct
ttggattgctcaggacagcaaactgcggtggatttgttccttttaagttcacaatattct
gatcttgcttctctagcttgtatgtccaagtattctgcagggtgcatctattattatccg
tctttccaccatactcacaatccttcacaggcagaaaagttacaaaaagacctaaaacga
tatctcacaagaaaaattggatttgaagccgttatgagaataaggtgtactaaaggtctt
tcaatgcatactttccatggaaacttctttgtgcgttccactgatttgttatcccttgcc
aatatcaatcctgatgctgggtttgcagtgcaattgtcaattgaagaaagtttgacagat
acttccttagtgtgcttccaaacagccctgttatatacatcaagcaaaggtgaacgcaga
attagagtgcatacactttgtttgccagtggtaagttcgctagcagatgtatatgcagga
gtagatgtacaagctgccatctgcctcctagcaaacatggctgtggatcgatcagtttca
tcaagtctgtcagatgcaagagatgccttagtgaatgctgtagtggattcactgtctgcc
tatggctctactgtctcaaatttgcagcactctgcattgatagcacctggctccctcaag
ttgtttcctctctatgttttagcccttctcaaacagaaagcatttagaacgggtacaagc
acacgcctggatgatcgtgtgtatgccatgtgtcagataaagtctcagcctcttgttcat
ctaatgaaaatgattcatcccaacctatatagaatagacagattgacagatgagggtgcc
atacatgttaatgacagggtggtacctcagccacctcttcaaaaattgtctgcagagaag
cttacaagagaaggtgctttccttatggactgtggctctgttttttacatttggattgga
aaaggctgtgacaataacttcattgaggatgtgcttgggtatcctaattttgcatcaata
ccacagaaaatgacacatcttccagagctagacacactttcatcagaacggaccagatcc
tttataacttggcttaaagatggcagaccgttaagtgcagtccttcatgtggtaaaagat
gagagtcctgccaaaacagaattttttcaacatttgattgaagaccggacagaagctgca
ttctcttactatgaatttttgcttcatgtacagcagcaaatatgtaagtga
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