Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972954
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Entry
101972954 CDS
T10664
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101972954 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101972954 (Ttc37)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101972954 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_14
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
Sel1
ARM_TT21_2nd
TPR_15
ARM_TT21_C
ARM_TT21_5th
Sey1_3HB
TPR_5
Fis1_TPR_C
DUF7017
Retrotran_gag_2
TPR_30
BTAD
SNAP
YceG_bac
TPR_20
DUF6596
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
101972954
NCBI-ProteinID:
XP_013214467
UniProt:
I3MMA9
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPNQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHRLIKTRQEEGADNQELHQLWRKLTQLLAESMEDQNNETQQ
LLLTAFENALGLSDKIPSEDHQVLYRHFIQCLLKFPHETARLKKACEGMINIYPTIQYPL
EVLCLHLIESGNLTDEGQQYCCKLVEMNSKSGPGLIGLGIRALQDKKYEDAVRNLTEGLK
ESPLCTAGWYHLSEVQIKMHRPKEAVLSCNQALKNIENHGVSGDSLYQKNLCLRLKAEAL
IKLSDYESSEEAICSLNQVSDANNIPGLLVLKSLAYLNKGLLDEATKIMEDLLSSYPDLA
EVHALEALIHFTKKDYLQAEKCFQRALERDAEVAEYHYQLGLTYWFIGEETRRDKTKALT
HFLKAARLDPYMGKVFCYLGHYYKDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEDMEAALAILTTVTQRASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASEINPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECYLMMAKAALVDYLDGKAVDYIEKSLEYFTWALQHRADVSCLWKLV
GDACTSLYAVSSSKVNVNILGVLLGQKEEKQALKKTELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAEMGSSMNDLKELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYRGV
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELNMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVVLCKYVERIQNYAPAFTMLGYLNEHLQLKKEAADAYQRAMLLLQTEEDQDTYN
VAVRNYGRLLSSIGEYDKAIQAFKSIPLEELEDLIGFALALFKKGLYKESSKAYERALSV
AESEQDKAYILTALAITEYKQGKMDIAKSLLFKCSILKEPTIESLQTLCALGLVMQDATL
SKAALNELLKHIKHKDSDYHRCLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQCAQQNAKGGAVAGNVAHILDSNHGKKALLYTAINQLAMGSSSAEDEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLALLSAVSASIKGKEFLENY
NQSLEKWSLSQAVTGLIDTGRVSEAEALCTKNLKNNPDQPAIILLLRQVQCKSLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLKLALLALEICMANVSSDHWPSLVQEATTEALKLCFCPLAVFLQALLQFNCKMGARE
TRRLLERVVYQPGYPKSIVSAARWYLLRHLYFKNDYELIDVLVKNAETHRDTRALELNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaagtgaagactgctctaaaaagtgcaagagatgcaattagaaacaaa
gaatataaagaagctttgaaacattgcaagacagtcttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagcagagctagaacaacctgatcaggcccaa
ggtgcctataagaaagctgctgaactagaaccaaatcaattattagcttggcaggggtta
gcaagcttgtatgagaagtgtaatcacataaatgctaaggatgacttaccgggtgtttac
caaaaactcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctctattaccaagaaaagaaacacctagaggtggctcgaacatggcat
agattgataaagacacggcaagaagaaggtgcagacaaccaggagcttcatcagctatgg
aggaaattgactcagttgctggctgagagtatggaagatcagaataatgaaacccagcaa
ttgcttttaactgcattcgagaatgccctgggcttatcagataagattcctagtgaagat
catcaagtactatataggcatttcattcagtgtttattgaaatttcctcatgagactgct
aggttgaagaaggcttgtgaaggaatgataaacatctatcccaccatacagtatccatta
gaagtgctctgtttgcatttaattgaatcaggaaatcttactgatgagggacagcagtat
tgttgtaagctagtggaaatgaattcaaaaagtggtccaggcctcattggcttaggcatt
agagcattacaagacaaaaaatatgaagatgctgttaggaatctaacagaagggctaaag
gaaagccctctctgcacagctggatggtatcatctctccgaagttcaaatcaaaatgcat
agacccaaggaagctgttctttcatgcaatcaagctctgaagaacatagaaaatcatggt
gtgtctggagacagtctttatcagaagaacctttgtcttcgtttgaaagcagaagctttg
attaaactctcagattatgaatcttcagaggaggcaatttgttctctcaatcaggtttct
gatgcaaataatatcccaggacttttggttctcaaaagcttggcttatctgaacaaaggc
ttattagatgaagctacaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgcccttgaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagagagcacttgagagagatgctgaagttgctgaatatcattaccagctt
gggttaacatattggttcataggtgaagaaacaagaagagataaaacaaaggctcttacc
cactttctgaaggccgcaagactggatccatacatgggcaaagttttctgctatttaggt
cattattacaaagatgtagtaggagataaaaacagagcacgaggatgttacaggaaagct
tttgaattagatgacactgatgctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagatatggaagctgccttagctatcctaacaacagtaactcagagggcaagtgct
ggaacggcaaaatgggcctggcttcggcgaggactatactatttgaaagctggtcaacat
tcacaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctatacaacagccttgaagtcc
ttcacaaaagccagtgagatcaacccagaatccacatacagtgtgtttaaggttgcagca
atacaacaaatcctaggcaagtacaaggaggccatagctcaataccagctgattattaaa
aagaaagaagattacgtacctgctttgaaaggtttgggcgaatgctatctcatgatggca
aaagctgctctagttgattatcttgatgggaaagccgtagactacatagaaaaatccctg
gaatattttacttgggccttgcagcatcgagctgatgtatcctgcctttggaagctggtt
ggggatgcttgtaccagtctgtatgcggtttcatcatctaaagtgaatgttaatatttta
ggggtccttctaggccagaaagaagaaaagcaagcattaaagaaaactgagctcctccat
cttggaggaaggtgttacggtcgtgcattaaaactgatgtctacatctaatacatggtgt
gatcttgggattaattattatcgccaagcacaacatctagcagaaatgggcagcagcatg
aatgatcttaaagagttgctagagaaatctttacattgtctgaaaaaggcagtgagactc
gacagtaataatcacttatactggaatgctcttggtgtagttgcatgttatagaggtgtt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
gctgtcgcgtggaccaatttgggagtgttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtctcttgatccatcttatttaatgtgctggattgga
caagctcttattgcagagacagttggaagttatgataccatggatctcttcaggcacact
acagaactcaatatgcatactgagggagcaataggttatgcatactgggtctgcacaaca
ttgcaagataaaagcaacagagaaacagagctataccaatacaacatcctccagatgaat
gctattccagcagcacaagttgttttgtgtaaatatgtggaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaggaagcagca
gatgcgtaccaaagggcaatgttgttgctacagactgaagaagatcaagatacttataat
gttgcagtaagaaattatggcagattgttgagttccattggtgaatacgacaaagctatc
caggcttttaagtcaatacctctcgaggagttagaagacctcataggctttgcattggct
ttatttaagaaggggctatataaagagagcagcaaagcatatgaaagagccttgtctgtt
gctgaatcagagcaagacaaagcctatatcttgacagctctggcaataacagaatataaa
caaggaaaaatggatatagccaagtcactgctattcaaatgctctattttaaaggaacca
accatagaaagccttcaaaccctgtgtgctctaggattggtaatgcaggatgctacactg
tctaaagcagcacttaatgagttactgaagcatatcaaacacaaagacagtgattatcac
aggtgccttcttacttcagctatttatgcactccaaggccgcagtgtggcagtacaacgg
caagcgtctaaagctgttcacagtaacccagctgatcctgctctttggtctctattatcc
cgagttgttgctcagtgtgctcaacaaaatgcaaaggggggtgctgtagcaggaaatgtg
gctcatattctggactcaaatcatggaaagaaggcattgctgtacactgcaataaatcag
ttggcaatgggaagcagttcagcagaagatgaaaaaaatattgcactaaagactatacag
aaggcagctctcctttctccaggtgaccctgctgtctgggctggactgatggcagcctgt
catgctgatgataagctggctctagtgaacaacactcagccaaagaggatggatttatac
ttggcactgttatctgctgtttctgcttcaattaagggcaaggaatttcttgaaaattat
aaccaatctcttgaaaagtggtctctctcacaagctgtcactggtctgatagacacagga
agagtatctgaagctgaagctctctgcacaaagaatttaaaaaataacccggatcagcca
gctattatattacttttgagacaagttcagtgtaaatcactcctggagtcacaaaagcca
ctcccagatgcagtacttgaggaacttcaaaaaacagtcatgtccaactcaacttctgtt
ccagcttggcagtggttggcacaggtgtatcagtctcaaggaatgatgggtgctgcagaa
atgtgttacagaaagagtctacaagtagcatctcaacagggaagctggagtgggaaactc
tcaagtctattgaaactagcattgcttgccttagaaatctgtatggctaatgtttccagt
gatcactggccatccttggttcaagaggctacaactgaggccttgaaactttgtttctgc
ccactagctgtttttttacaagctttgttacaattcaactgcaaaatgggggcacgagag
actcggcgacttttggagagagtggtatatcaacctggatatccgaaatctattgtatca
gctgcacgttggtacctgttaagacacctgtacttcaaaaatgactatgagctcattgat
gtgttggtaaaaaatgctgaaactcacagagatacaagagcattggaactgaatcagaaa
ttgtcctcacagtaa
DBGET
integrated database retrieval system
