Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978276
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Entry
101978276 CDS
T10664
Symbol
Atad2b
Name
(RefSeq) ATPase family AAA domain-containing protein 2B isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101978276 (Atad2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
AAA_16
AAA_22
AAA_2
IstB_IS21
nSTAND3
NPHP3_N
AAA_5
SLFN-g3_helicase
AAA_7
RNA_helicase
ResIII
Mg_chelatase
RuvB_N
AAA_28
TIP49
AAA_18
Motif
Other DBs
NCBI-GeneID:
101978276
NCBI-ProteinID:
XP_005322701
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MVNTRKSSLRLLGSKSPGPGPGPGAGAEPGATGGSSHFISSRTRSSKTRAASCPAAKAGG
SSGAGVALDEARKAEVDGSLSDSHVSPPAKRTLKQPDSVCKDKSKSRSTGQREEWNITTG
QTRLTSQPGATLPNGHSSLSLRSHPLRGEKKGDGDLSCINGDMEVRKSCRSRKNRFESVN
QSLLFDQLVNSTAEAVLQEMDNINIRRNRRSGEVERLRMWTDTEFENMDMYSRVKRRRKS
LRRNSYGIQNHHEVSTEGEEEARTSILLPLEKNSIESQEEDGDIEVEEAEGEENDRPYNL
RQRKTVDRYQAPPIVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEERFE
RRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADVDPMNIDKSVRFDSIGGLS
QHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVA
FFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIV
STLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT
RDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLDVSSI
VLSAQDFYHAMQNIVPASQRAVMSSGHALSPIIRPLLERSFNNILTVLQKVFPHAEISQS
DRKEDIENLILDDSEDENALSIFETSCHSGSPKKQSSTAAIHKPFLHFTMSPYHQPTSYR
PRLLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFREARRT
VPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEEVKCIFR
IQYEEVLYIQRPVEEDRRKFFQELILNQASMPPPRRKHTALCAMEVLPLALPSPPRQLSE
SEKNRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLS
TVITKIDKHNYLTAKDFLQDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAE
LDPEFNKLCEEIKEARIKRGLSVTAEQINPHGTGARKTETRVEEAFRHKQRNPMDVWHNS
ANKCAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYDNHTEDRKLLENGEFEV
STDCHEENGEETGDLSMTNDESSCDIMDMDQGQRLNNGAGTKENFASTEEESSNESLLIH
SSSTLNPEQTSRKEPFLKGSCLNGEASTDSFEGIPVLECQNGKVDVIPLCGSGDKCSSEQ
KIVLENQLKEKPEISNENHGDDPEKLEAPECSSTEKLEPGPDVEVKDAELDKEGKANILK
HLLKV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacacccggaagagctctctgcgccttctcgggtccaagtctcccgggcccggg
cctgggcctggggccggagcagagcctggggcgaccggaggcagcagccatttcatctcc
tctcggacccgctcctccaagacccgcgctgccagctgccccgccgccaaggccggggga
agcagtggcgccggcgtcgctctggatgaggcccggaaagctgaagttgatggtagttta
agtgatagccacgtatctcctccagccaaacgcactttgaaacaaccagattctgtttgc
aaagacaaatcgaaatctcgaagtactggtcagcgagaagaatggaacataacaactgga
cagaccaggttaacttctcagcctggtgctacgttaccaaatggacatagtagcttatcc
cttcgaagccatccccttagaggggaaaagaagggagatggggacctttcttgtataaat
ggtgacatggaagtcagaaaaagttgtcgttccaggaaaaacagatttgaaagtgtgaac
cagagtttgctgtttgatcaactagtaaatagtactgctgaagctgtactacaagaaatg
gacaacattaatatccgacggaatcgacgatcaggagaagtggaacgacttcgaatgtgg
acagatacagaatttgaaaacatggatatgtattcaagagtgaaaagacgaagaaaatca
ctaagaagaaatagttatgggattcagaatcatcatgaagtttctactgagggtgaagaa
gaagctagaacctctatattgcttcctttggagaaaaacagtatagaatctcaagaggag
gatggagatatagaagttgaagaggcagaaggagaagaaaacgatagaccatataattta
agacaaagaaaaacagtggatcgataccaggcacctccaatagtgccagctcatcagaag
aagagggaaaacacactgtttgatattcacagatctccagcaagaagaagccatatcagg
agaaagaagcatgccatccatagtagtgacacgacttcttctgatgaagagcgctttgaa
agaaggaaatcaaagagcatggcgagagcaagaaataggtgtttgcctatgaacttcaga
gcagaagacttagctagtggtattctccgagaacgagtgaaagtgggtgcaagcttggct
gatgttgacccaatgaacattgataaatcagtacgatttgatagcataggtggattgagt
cagcatattcatgcactaaaggagatggtagtatttccacttttatatccagaaattttt
gaaaaatttaaaattcagcctcccaggggctgtctgttttatggccctcctggcacaggt
aaaaccttggttgccagagcattagctaatgaatgcagtcaaggagacaaaaaagtggct
ttttttatgcgaaaaggagcggattgtttgagcaagtgggttggtgagtctgaaaggcaa
cttaggcttctttttgatcaggcatacttgatgagaccttctataatattttttgatgaa
atagatggattagctccagttcgctctagtagacaagatcagattcacagctcaatagtg
tcaaccctccttgctctaatggatggattagataataggggcgaaatcgttgttattggt
gctacaaacagacttgattctatagatcctgcactcaggagacctggtcgttttgataga
gaattccttttcaacttgcctgatcaaaaagcaagaaaacacatcttacagatccatacc
agggattggaatccaaaattgtcagatgcttttttaggtgaactagccgaaaaatgtgtt
ggctactgtggagctgatatcaaggccctgtgcactgaagctgccctcattgctcttcgg
aggcgatatccgcagatatatgctagcagtcataaactgcagctggatgtttcctcaata
gtgctcagtgcccaagatttttaccatgcaatgcagaatatagtgcctgcttcccaacgt
gctgtgatgtcttcaggacatgcactatcacctattataaggccactgctggaaaggagc
ttcaacaacattctaacagtcttgcaaaaagtgtttcctcatgctgaaattagccagagt
gacaggaaagaagatatagaaaatctaattttagatgatagtgaagatgagaatgcttta
tcaatttttgagactagttgtcactcaggatcaccaaagaaacagtcatcaactgctgct
atacataaacccttccttcattttacaatgtcaccataccatcagccaacctcttacaga
ccacgattattgctatctggagaaagaggctcaggtcaaacttctcaccttgctccagca
cttttgcatactctagaaagattctctgtgcatagactagatctcccagcactttattca
gtcagtgccaaaacacctgaagaatcatgtgcacagatatttcgagaagctcgaagaaca
gtacctagtattgtttacatgcctcacattggcgattggtgggaagctgtcagtgaaact
gtgagagcaacttttctgacattgctacaagatataccatcattttcacccatattttta
ttgtctacctctgaaaccatgtacagtgaattgcctgaagaggttaagtgtatctttaga
atacagtatgaagaggtcttgtatattcaaaggcctgttgaagaagacagaaggaaattt
ttccaggaactgattctcaatcaggcatcaatgccaccaccacgaaggaaacacactgct
ctttgtgctatggaagtgcttcctcttgcactaccttctccacctcgtcagttgtcagaa
tcagaaaaaaatcggatggaggaccaggaggaaaatactttaagagaattgcggttgttt
ctcagggatgtaaccaagaggctggccacagataaacgctttaacatcttcagcaaaccg
gtggatattgaagaggtttcagattatcttgaagtaatcaaagaaccaatggatttatca
acagtaataactaaaattgataaacataattatcttactgctaaagatttcctgcaagat
attgacctaatctgtagcaatgctttagagtacaatccagataaggacccaggagataaa
ataattagacacagagcttgtaccctgaaggacactgcacatgccatcattgcagctgaa
ttagatccagaatttaataaactctgtgaagaaattaaagaagcaagaataaaaagaggc
ttatcggtaacagcagaacaaataaatcctcatggcactggagctcggaagacagaaact
agagttgaagaggcatttcggcacaaacaaagaaatccaatggatgtctggcacaactct
gcaaataaatgtgcatttcgggtacggagaaaatcaaggcgacgatcacagtggggtaaa
ggaattattaagaaaagaaaagttaataatttaaaaaaagacgaagaggataccaaattt
gcggactatgataaccatacagaggacagaaaattgctagagaatggagagtttgaggta
agcactgattgccatgaggaaaatggagaagagactggggacttatctatgaccaatgat
gaatcctcatgtgacatcatggacatggaccaggggcagaggctaaacaacggagcaggc
actaaagagaactttgcatccacagaagaagaaagttcaaatgaatctctgctcatccac
agcagcagtactcttaatccagaacagacatctaggaaggagccttttcttaaaggcagc
tgtctgaatggtgaggcctccactgacagttttgaaggaatacctgttctggaatgtcag
aatggtaaagttgatgtcattcctctctgtggtagtggagataaatgcagttcagaacaa
aagattgtcctggaaaaccagttaaaagaaaaaccagaaatttcaaatgaaaatcatgga
gatgatcctgagaaactagaggcaccagaatgtagcagtactgagaaattagaacctggc
cctgatgtggaggttaaagatgcagaattggataaagaaggtaaagctaatattttaaaa
catcttctgaaggtttaa
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