Ipomoea triloba (trilobed morning glory): 115995831
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Entry
115995831 CDS
T07384
Name
(RefSeq) zinc finger CCCH domain-containing protein 46-like
KO
K14321
nucleoporin-like protein 2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115995831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
115995831
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115995831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Torus
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
115995831
NCBI-ProteinID:
XP_031090843
LinkDB
All DBs
Position
1:complement(33228873..33233066)
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AA seq
340 aa
AA seq
DB search
MPPRKEPCRNFLRGSCHYGDRCKFLHVTQQQPKPNVFGFGSQSGTQFQRTNFQQQQQPPN
PFGFGVQNSSQSRGANDVGLKQNQHKPFENKWIRSSANASNTSARQPDNQQAAANHVCTD
PESCKRQIIEDFQNEKPLWNLTCYGHRKNGPCDVIGDVSYEELRVAAYDDAKRGLNLQSI
VERERGLITSKLAEFDNLVRNSYSASANSAFGSGSQSPLFGASQNVTTSAQSPPLTSSFS
QLGAFLNTGLSATPSNTLQQSNPFENFSQVSGTFGVNNVPFGNAGSLGSQFGAQSFHSPF
TSSSATLNNAMAGERNSSSVSLFPQLSGSVGQSFGNTGLM
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaggaaagagccgtgccggaatttcctccgtggaagctgtcattacggtgat
cgttgtaaatttcttcatgttacccaacaacagccaaaaccaaatgtatttggatttggc
agccaaagtggcacccagtttcagaggacgaattttcagcagcagcagcagccgcccaat
cctttcgggtttggtgttcagaatagctctcagtcaagaggagccaatgatgttggttta
aaacagaatcaacacaagccatttgaaaataagtggatccgttcatctgcaaatgccagt
aatacctctgcgcggcaacctgacaatcagcaggcagcagcaaatcatgtctgcacagat
ccagagtcttgcaaacgtcaaatcattgaagattttcaaaacgagaagcctctttggaac
cttacctgctatgggcaccggaaaaatggtccctgtgatgtcattggtgatgttagctat
gaagagctgcgagtagcagcatatgatgatgctaagcgtgggctgaacttacaatcaatt
gttgagagggagaggggtctaattacatccaagttagctgaatttgataacttagttcgt
aattcttattcagcttcagcaaattcagcttttggttctggttctcaaagtcctcttttt
ggggccagtcaaaatgtcacgacgagtgctcaaagtcctccactcacctcaagttttagt
cagttgggcgcttttttgaatacagggctatcagctaccccaagtaacactttgcagcaa
tcaaatccctttgagaacttcagtcaggtgtcgggtacatttggggtgaataatgtgcca
tttggaaatgcaggttctttgggcagccagtttggtgctcagtcatttcatagccccttc
acctccagttcagcaaccctcaacaatgccatggctggtgagaggaactcatcttccgtg
tctctctttccacaactttctggttctgttggacagtcatttggcaatactggcttgatg
taa
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