Ipomoea triloba (trilobed morning glory): 116002496
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Entry
116002496 CDS
T07384
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116002496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116002496
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116002496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_10
HVO_0758
Motif
Other DBs
NCBI-GeneID:
116002496
NCBI-ProteinID:
XP_031098503
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Position
13:29924139..29928051
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AA seq
791 aa
AA seq
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MDFVELEAIEGLRWSWNSWPVSKSEASGLVVPLAIMATPLMAFNELPVLPYDPLICSDCG
AVLNPYARVDYTTRIWACPFCYRKNPFPKSYLAISENNIPAELFPTYSTVEYQLGKKGLA
MGHNNNHSAPNLVPGFGNGSPRSPGASFSSLPSFSGSSSSVGPGADWTGPAFVFVVDACT
PDEELRVVKNELLHVIAQLPDYALVGLVVFDSMVRVYDLSFADCFRVVLFHGERELSSQE
TKQLLGIHQVKYQMGMMPSVQKEGFLVRLSDGEFNITAAIEDIQSSPNVRPGHRPVRATG
VAVSVAVGLLEGYLVNTGSRITIFTSGPATIGPGKVVDSDFRNAIRTHRDVDNGHAAYYR
KSCGFYKKISERLSDSSIVLDLFACSLDQVGAAELKEPVECSGGFMMLGESFDSDQFKKC
LRHLYSRDEFGNLKMCFDATLEIVTTKDVRICGALGPCVSLHKKNGSVSDKEIGQGGTHI
WKLGTLTNKTCIAFYFEVGGEQKAQPSSAFFIQFITRYRCGNMGFRKRVTTAARRWAGNH
SAEIVAGFDQEAAASLMARLAIHRLGSNFAPDVIRWLDKMLIRFASKFGDYVQEDPSSFR
LSSTFSLYPQFMYYLRRSQFIEVFNSTPDETAFFRLMINREGVVGSLIMVQPTLFQYSFD
GPPVPVLLDVCSISPDVILLFDSYFHVVIHYGSKIAQWRKLGYDKDPSHESLRKLLEAPE
VDAEQLVAERFPVPRLIKCDQHGSQARFLLAKLNPSVTHNSTHTDGKDVIFTDDISLQVF
IEHLQSLAVQG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtggagctggaggcgatcgagggcctccgatggtcgtggaactcctggccc
gtttcgaaatccgaagcttcgggtttagttgtccctctcgcgatcatggccacgccattg
atggctttcaatgagctcccggtgctcccttacgaccctctcatttgctccgactgcggc
gcggtcttgaatccctacgcccgcgtcgattacacgacccggatttgggcctgcccgttt
tgctaccggaaaaacccgttccccaaatcgtacctcgccatcagcgagaacaacatcccg
gcggagcttttcccgacgtatagtacggtggagtatcagctggggaagaaggggctggca
atgggccataacaacaatcattcggctccgaatttggtgcccgggttcggaaacgggtct
ccgaggtcgccgggggcgtcattttcttctctcccttcgttttccggctcctcctcttct
gtggggcccggggcggattggaccgggccggcattcgtgtttgtcgtggatgcttgtacg
ccggacgaggagctgagggttgtgaagaatgagcttttgcacgtgattgcgcagctgccg
gattatgctttggtggggttggtggttttcgactccatggttagggtttatgatctcagc
tttgcagattgcttcagagtggtgcttttccatggggagcgtgagctctcatctcaggag
accaagcagttactaggcattcatcaggtgaagtaccaaatgggaatgatgccaagtgtg
cagaaagagggattccttgtacggttgtcagatggggaatttaatataacggctgcaatc
gaggatatccaatcctcaccaaatgtcaggccaggccatcgtcctgttagagccacggga
gttgcagtttcagttgctgttggacttctagaaggatacttggttaacacaggttctcgt
atcacgattttcacctcagggccagcaaccattggcccagggaaggtggtagattcagat
tttcgaaatgcaatcagaactcacagagacgtggataatggtcatgcggcttattacagg
aagtcttgtggattttacaaaaaaatctcggagagactttccgattcatcaattgttctt
gatctgtttgcctgttcgttggatcaagttggagcagcagaacttaaggagcctgtggaa
tgttcgggaggtttcatgatgttaggagaatctttcgactccgaccaattcaaaaagtgt
ttgcgtcacttgtacagccgcgatgagtttgggaatctgaagatgtgtttcgatgcaacc
ttggaaatagtaaccacgaaagatgtaagaatttgtggagcccttggcccttgtgtatcg
ctacacaagaagaatggttcggtgagtgacaaagaaattggtcagggcggtacccatatc
tggaaattaggtacactcaccaacaaaacgtgcatcgccttctattttgaagtcgggggt
gaacagaaagcgcaacccagctctgcgttcttcatacagttcataacacgctacagatgc
ggaaacatgggatttcggaaaagggtgacgactgcagcgagaaggtgggctgggaaccac
tccgcggaaattgttgccgggttcgatcaggaagctgctgcatcgttaatggctaggctc
gccatccatagactcgggagcaattttgcgcccgatgtaatcaggtggctggataaaatg
ttgatacgcttcgcttcaaagttcggggattacgtgcaggaagacccatcttccttccgt
ctctcgtccacgttctccctatacccacagttcatgtattatttaaggcggtctcagttc
atcgaggttttcaactccactcccgatgagaccgcattcttcaggctgatgataaaccgc
gagggagtggtagggtctcttataatggtacaaccaaccctcttccagtactcattcgac
ggtccccccgtccccgttctactcgacgtgtgctccatctccccagacgttattcttctc
ttcgactcctacttccacgtcgtcatacattatggctctaagatcgcacagtggcgaaaa
ctcggctatgacaaggaccctagccatgaaagcctcaggaaactgttggaagctccagaa
gtcgacgctgagcaactggtggccgagcgctttcctgttccgaggctcatcaaatgcgat
cagcacggtagtcaggcaaggtttctcctcgcgaaattgaacccatctgtaactcataat
tctacacacacagatggcaaagatgttatattcacagatgatattagcctgcaagtattc
atagagcatttgcagtctttggcagtgcagggttga
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