KEGG   Ipomoea triloba (trilobed morning glory): 116007936
Entry
116007936         CDS       T07384                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03013  Nucleocytoplasmic transport
itr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116007936
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116007936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    116007936
   04131 Membrane trafficking [BR:itr04131]
    116007936
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116007936
Membrane trafficking [BR:itr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    116007936
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    116007936
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    116007936
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 WD40_2 SH3-RhoG_link
Other DBs
NCBI-GeneID: 116007936
NCBI-ProteinID: XP_031104455
LinkDB
Position
16:complement(8381030..8381935)
AA seq 301 aa
MPAQKIETGHTVIVHDVSMDYYGKRVATASSDAMIKITRVSNNSTTQHLATLSGHRGPVW
QVAWAHPKFGSLLASCSYDGKVIIWKEGNQNEWTQYRVFSEHKSSVNSISWAPHELGLCL
ACGSSDGCISVYSARSDGSWDTKRIDQAHPVGVTAVSWAPPMVPGAIVGSGLLDPVRKLA
SGGCDNTVKVWKLCNGVWKMDSLPALQKHSNWVRDVAWAPNLGLPKSTIASASEDGTVVI
WSVAKEGDQWEGKVLNDFKNPVWRVSWSLTGNMLAVASGDNNVTLWKEAVDGEWQQLKTD
H
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagattgaaacaggtcatactgtcatagtacatgacgtatccatggat
tactatggaaaacgtgtggcaacagcttcgtctgatgcaatgatcaaaataactcgtgtg
agcaacaattctactacgcagcatcttgctactctaagtggtcatcgtggtccagtttgg
caggttgcttgggcacaccccaaatttggttcactccttgcttcctgttcctatgatggt
aaagtcataatctggaaggaaggcaaccaaaatgaatggacacaatatcgtgttttcagt
gagcataaatcatcggtcaattctatttcttgggctccccatgaacttgggctgtgcttg
gcctgtggatcttctgatggatgtatctctgtttatagtgccaggtcggatggtagttgg
gacaccaaaagaatcgatcaggcacaccctgttggagtaactgcagtgtcatgggctcct
ccaatggttcctggtgctatagttggctctggtttacttgatcctgttcgtaagcttgca
tctggtgggtgtgataacacagtgaaggtgtggaagctctgtaacggcgtttggaagatg
gattctctcccggcccttcagaagcacagtaattgggtgagggatgtcgcgtgggcaccc
aacttggggcttccaaagtcgacaattgcaagtgcttccgaggacgggactgttgttata
tggagtgtggcaaaagaaggagatcagtgggaggggaaggttttgaatgacttcaagaat
cctgtttggagggtttcatggtctctgacaggaaacatgttggctgtagcctctggggac
aataatgtcacgctgtggaaagaagcagtggatggggagtggcaacaactcaaaactgac
cattag

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