Ipomoea triloba (trilobed morning glory): 116014813
Help
Entry
116014813 CDS
T07384
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116014813
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116014813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116014813
NCBI-ProteinID:
XP_031110628
LinkDB
All DBs
Position
4:complement(3958144..3961584)
Genome browser
AA seq
382 aa
AA seq
DB search
MGNHHGRYSDHRHHHNPAAFPGPAPLPPHTYKYEPPNQSAPPIQHPHTSNMALLLPYAHV
DSTLRALAGQAEGFGRFAVGGLHGPLYHVTTLADDGPGSLRDGCRRKEPLWIVFEVSGTI
ELRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGHDVDGIQIKPNS
KHIWIDRCSLSDYDDGLIDITRESTDITISRCHFSKHDKTILIGADPSNITDRCMRVTIH
HCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKGAFRY
LSEKATDKLEECIGSIKSEGDLFVSGTQSGLMPTPNEGAIFHPTEHYPTCTVEPPSDSLK
HFLQHCTGWQCIPRPPDLPVVA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaccatcacggccgttactccgaccaccgacaccaccacaaccccgccgcgttc
ccgggccccgcacctctaccaccacacacctataaatatgagccgccaaatcagtctgcg
ccaccaattcagcacccgcacacttctaacatggctcttcttttgccttacgcccacgtg
gactccactttgcgtgctctagccggccaggccgagggatttggccgcttcgccgtcggt
ggcctccacggccctctctatcacgtcactactttagccgatgatgggccagggtctctt
cgagatggatgtcgtaggaaggagcctctctggattgtgtttgaagtttcaggaaccatt
gaacttaggtcttatttaaatgtttcatcgtacaaaacgattgatgggcgaggtcaaaga
attaaactcactggaaaagggttgaggttgaaggagtgtgaacatgtaattgtctgcaat
ctagaatttgaaggtggtagaggacatgatgttgatggcatccagattaaacccaattca
aagcacatatggatagaccgttgcagtctcagtgattatgatgatgggttaattgatatc
acccgggagagtacagatataactatttctaggtgtcacttctcaaagcatgacaaaaca
atccttattggggcagatccttccaacataacagacagatgtatgagggtgaccatacac
cattgtttctttgatgggactagacagcgccatcctcgtgtcaggttcgcaaaggtacat
ttgtacaataactacacaagaaactggggaatttatgctgtttgtgccagtgtagaatca
cagatatactcgcaatgcaatatatatgaagcaggacagaagaagggagcctttaggtat
ctctcagagaaggctactgacaagttggaagaatgcataggcagcatcaaatctgaaggc
gacttgtttgtcagcggaactcagtctggcctgatgccaacccccaatgaaggtgccata
tttcatcctaccgaacactaccctacgtgcaccgtggaacctccctccgacagcctcaag
cacttccttcaacactgcacgggatggcaatgcatcccacgacccccagatctgcccgtg
gtcgcttaa
DBGET
integrated database retrieval system
