Ipomoea triloba (trilobed morning glory): 116027858
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Entry
116027858 CDS
T07384
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116027858
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116027858
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116027858
NCBI-ProteinID:
XP_031125482
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Position
8:20420063..20422749
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AA seq
410 aa
AA seq
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MAMPPLHYFLFLLPLLLPYPTFTTASSPFPDPEVIVQEVNEKINNATISARRKLGFLSCG
TGNPIDDCWRCDPNWDKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGDHPVNPKPGTLR
YGAIQDEPLWIIFGRDMVIKLKEELMLNSFKTLDGRGASVHIAGGPCITIQYVTNIIIHG
LNIHDCKQGGNAYVRDSPDHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHA
STAITISNNYMTHHNKVMLLGHSDTLIADKNMQVTIAFNHFGEGLIQRMPRCRHGYFHVV
NNDYTHWEMYAIGGSADPTINSQGNRFLAPNDRFNKEVTKHEDAAESEWKKWNWRSEGDL
MLNGAFFTRSGAGASSSYAKASSLSARPSSLVSSLTGNAGSLTCRKAKRC
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccgccacttcattactttcttttcctccttcctcttcttcttccctatccc
accttcacaaccgcctcttctccattcccagatcctgaagtcatagttcaagaagtgaat
gagaaaatcaataatgccacaataagtgcaaggaggaagttggggttcctgtcatgtggc
acagggaacccaattgatgattgctggaggtgtgacccaaactgggacaagaaccggcag
cgcctagcggattgtgcgatcgggtttggcaaacatgccattggtggaagggacggcaag
atttacgtggttacagactcgggggatcacccggtgaacccaaagccggggacactgagg
tacggggcgatacaagacgagccattatggatcattttcgggcgggacatggtgataaag
ctgaaggaagaactaatgctcaactcattcaagaccctagatggaaggggggcaagtgta
cacatagcagggggtccctgcatcacaattcaatatgtgacaaacatcatcatccatggg
ctaaacatccatgattgcaagcaaggagggaatgcgtatgtgagggactccccagatcat
tatggatggaggacattgtcagatggggatggagtgtccatatttggagggagccatgtg
tgggttgatcattgctccctctcaaactgcagggatgggttgattgatgccatccatgcc
tccactgccataaccatctccaacaactacatgacccatcacaacaaggtcatgctcttg
ggccatagtgatacccttatagcagacaagaacatgcaagtcaccatagccttcaaccat
tttggagaagggctgattcagagaatgccaagatgcagacatggatatttccacgtggtg
aacaatgactacacccactgggaaatgtatgcaattggtgggagtgctgaccctacaatc
aatagccaaggcaatagattccttgctccaaatgacagatttaacaaagaggttacaaaa
catgaggatgcagcagagagtgaatggaagaaatggaactggagatcagaaggggatctg
atgttgaatggagctttctttacaaggtcaggtgcaggggcttcatctagctatgcaaaa
gcatcaagcttgagtgctaggccatcttctctcgtcagttccctcacagggaatgcaggt
tcacttacctgcagaaaggccaaaagatgttaa
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