Ipomoea triloba (trilobed morning glory): 116027885
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Entry
116027885 CDS
T07384
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116027885
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116027885
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116027885
NCBI-ProteinID:
XP_031125512
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Position
8:18234615..18239044
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AA seq
446 aa
AA seq
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MRGLIKNQQISIYLFFLLLVVAATLQADIAEYDAYLKKKADEALQSSLQAYYDNPEEVTD
DFNAEVGHTIMNWTTTRRHLKEKRGSHCKATNPIDRCWRCDRNWAKNRKRLALCARGFGR
GTTGGIKGRFYVVTDSSDNDLENPRPGTLRYAVIQEEPLWIIFKKSMVITLKQELIINHD
KTIDGRGVSVHIAYGAGLTIQFVRNVIIHGIKIHHILPKMGGMIRDSVNHIGLRTMSDGD
GISVFGSNHVWLDHLTMSKCSDGLIDAIMASTAITISNCKFNHHDHVLLLGASDSFSEDA
IMQVTVAFNRFGKGLVQRMPRCRWGFFHIVNNDYYKWGMYAIGGSSRPTIVSQGNRFKAS
SNPFTKQVTKREIVPKNVWGNWQWRSEGDLFLNGAYFVESGKDLNRNNTRFNNTNRIKHK
PGSYVGRLTRTSGALKCKAYSKEKYY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagggggttgatcaagaaccagcagatttcaatttacttgttctttctcctccttgta
gttgctgctacattgcaggcggatatcgcagaatatgacgcctatttgaagaagaaagcc
gatgaagccttgcaatcgtccctgcaggcttactacgacaatcctgaggaagtcacagat
gattttaatgcggaagttggacatacgataatgaattggaccactacgagaaggcacctt
aaagaaaaaaggggaagccattgcaaggcaacaaaccccatagacagatgctggaggtgc
gatcggaactgggcaaagaacagaaagaggctagcgctctgcgcccgcggcttcgggcgt
ggcaccacggggggaataaaaggccgattttacgtggtaaccgattcatctgataacgat
ctggagaatcccaggccaggaacgcttcgatacgcagtgattcaagaagagccactttgg
atcatcttcaagaaatcaatggtaataacacttaagcaggagctgattataaatcacgac
aaaaccattgatgggcgaggggtgtctgtgcacattgcgtatggtgctgggttgaccata
cagtttgtgaggaatgtgatcatccatggcattaagattcaccacattttgcccaaaatg
ggtgggatgattagggactctgtgaatcatattgggctcaggacgatgagcgatggagat
gggatctccgtctttgggtctaaccatgtctggcttgaccatctcaccatgtccaaatgc
agtgatggactcatcgacgcaatcatggcttccactgctatcaccatctcaaactgcaaa
ttcaatcaccacgaccacgtgctgctgttgggtgcgagtgactcgttttcagaagacgcc
atcatgcaagtgacagtggcattcaatcggtttgggaagggcttggttcagaggatgcca
aggtgccgatgggggttcttccatatcgtcaacaacgactattataagtggggaatgtat
gccattggaggtagctccagacccaccattgtgagccagggcaacaggttcaaggcctcc
agcaatccattcactaagcaagtaaccaagagggaaatcgttccaaaaaatgtgtgggga
aactggcaatggagatcagagggggatttgttcttgaatggagcctactttgtagagtcg
gggaaagatctcaaccgcaacaacactcgtttcaacaacactaacagaatcaaacacaag
cccggctcgtatgttgggcgtctcactcgaacttctggcgcactaaagtgcaaggcttat
tcaaaagaaaaatactactga
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