Ipomoea triloba (trilobed morning glory): 116031467
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Entry
116031467 CDS
T07384
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116031467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116031467
Spliceosome [BR:
itr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116031467
Complex C
U4/U6.U5 tri-SnRNP related factors
116031467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
NAD_kinase
Methyltransf_12
DUF2000
WRNPLPNID
zf-C2H2
PA26
Vfa1
Motif
Other DBs
NCBI-GeneID:
116031467
NCBI-ProteinID:
XP_031129547
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All DBs
Position
10:19136596..19141864
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AA seq
202 aa
AA seq
DB search
MAEPNNNVVGIDNTFRKKFDREEYLQRAREREEKEAEGRKSKARGPPVQRKPLKQRDYEV
DLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER
ASLKQVQERFEVLKKRKDSTSITVQDFDERMLKQQQEEEERKRQRREKKKEKKKEKAAEE
EPEEDADIAAMMGFGGFRTSKK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccaacaacaatgttgttggaatcgataacacctttcggaaaaaatttgat
cgagaagaatacttgcagcgtgctcgtgaacgggaagaaaaggaagctgagggacggaag
tccaaggcaagaggtcctccagtgcagaggaagcccttgaagcaaagggattatgaagta
gacctcgaatctcgcttgggaaagactcaggttgtgactccaatagcacccttaagtcaa
caggctggatactattgctcagtttgtgaatgtgtagtcaaggattcagcaaactacctg
gaccatatcaatgggaaaaaacatcaacgagctttgggcatgtctatgcgagtggagcgg
gcatctttaaagcaagtccaagagcgatttgaagtgctaaagaagcggaaagatagtact
agcatcaccgtgcaagatttcgatgagcgaatgttgaaacaacagcaagaagaggaagag
aggaaacgccagcgtcgagaaaagaagaaagagaaaaagaaagagaaggcagcagaggag
gaacctgaggaagacgctgatattgcagcaatgatgggatttggtggcttccgaacatct
aaaaagtaa
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