Ipomoea triloba (trilobed morning glory): 116031742
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Entry
116031742 CDS
T07384
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116031742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116031742
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
116031742
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116031742
DNA repair and recombination proteins [BR:
itr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116031742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
116031742
NCBI-ProteinID:
XP_031129895
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All DBs
Position
10:21511159..21515641
Genome browser
AA seq
359 aa
AA seq
DB search
MPELPEVEAARRAVEEHCTGLKIKKAIIANDFKVIDGVSSEDFEASILGKTIVAAHRKGK
HMWIQLDSPPFPTFQFGMAGAVYIKGVAVTKYKRSAVSDEDEWPSRHSKFFIELENGLEL
SFTDMRRFARVRLLENPAAVPPISELGPDALLKPKTIEEFHKALSKKKIGIKTLLIDQNF
ISGIGNWIADEVLYQARIHPLQITSSMSKESCAALLKCINEVIEKAVEVGADSDQFPGNW
IYHFREKKDNAFIDGRKIEFLVAGGRTSAIVPELQKLTGSQPAKASKKQDKKSGGKDTTA
AADEDEPAKTTPKRKSNKSIDNDASSGGSDDENDFDASQKPSKKKAASTRSRKQSKKAK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaggtggaggcggctcggagagccgtggaggaacactgcaccggc
ttaaagatcaagaaagccataatcgccaacgattttaaggtcatcgatggcgtgtcttct
gaggacttcgaggcttctattctggggaaaaccatcgtcgctgctcaccgcaagggcaaa
cacatgtggattcagctcgattctcctccttttcctactttccagtttggaatggccggt
gctgtgtatatcaagggagtagctgttacaaaatataaacggtctgctgtcagtgatgag
gatgagtggccttccagacattcgaagtttttcattgaactggaaaatggcttggagctt
tcattcactgatatgaggagatttgctcgagttcggttacttgaaaatccagctgctgtg
cctcctatatcagagcttggacctgatgcattattgaagccaaagacaatagaagagttc
cacaaagctctaagcaagaaaaagattggaattaagacccttttaattgaccagaatttt
atatctggtattggtaactggattgcagatgaagtgctatatcaggcaagaattcatcca
ctgcagatcacttcaagcatgtccaaagaaagttgtgcagcactactcaaatgcataaat
gaggttattgaaaaagctgtagaagttggagcagatagtgatcagttccctggtaattgg
atttaccattttcgggaaaagaaggacaatgcttttattgatgggaggaaaattgaattc
ttagttgccggtggcaggacatcggccattgtacctgagctacaaaagctaacaggatct
cagcctgctaaagctagtaaaaagcaggacaaaaaatcagggggaaaagatactactgct
gctgctgatgaagatgagccagcaaaaactactccaaaaagaaagtctaataaaagcatt
gacaatgatgcttcttctggtgggagtgacgatgagaatgacttcgacgcatctcagaag
ccatccaagaaaaaggcagcatccacccgaagcaggaagcagtccaagaaagcaaagtag
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