Ipomoea triloba (trilobed morning glory): 116033661
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Entry
116033661 CDS
T07384
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116033661
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116033661
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116033661
NCBI-ProteinID:
XP_031132279
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Position
10:complement(26601901..26603704)
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AA seq
351 aa
AA seq
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MNIIDSCWRSNPNWAHNRHALADCAIGFGSGAVGGKNGKIYVVTDPSDDPINPKPGTIRY
GAIQTEALWIVFEKDMVITLENELMVNSYKTIDGRGAKVEIANGPCVTIEDVTNVIIHGI
SIHDCMPGKRGMVRRSPDHVGERIGSDGDAISVLASSHVWVDHCFLARCADGLVDVIHAS
TAVTISNNYFTQHDKVMLLGHRDSYTADRVMKVTVVFNHFGRDLVQRMPRVRHGYAHVAN
NYYDQWLQYAIGGSAGPTILSEGNYFVASDDVAPQNKEVTKREINNGGWKAWKWRSTKDV
FLNGAYFVPSGYGICSPSYATSQLFVAAQGSLVPSLTYHAGPLQCVVGEKC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgattcgtgttggagatccaacccaaactgggcccacaatcgccacgcc
ttggcagattgcgctattggctttgggagtggagcagttggtgggaaaaacggcaagata
tatgttgtcacggacccttctgacgaccctataaaccccaaaccagggacgatacgttat
ggggcaatccaaaccgaggcactttggatcgttttcgagaaggacatggtgatcacgcta
gagaatgagctgatggtgaatagctacaagaccatagatgggagaggtgctaaggttgag
attgcaaatggcccgtgcgtgacaattgaggatgttacgaatgttattattcatgggatt
agcattcatgattgtatgcccgggaaacgtgggatggtccgaagaagtcccgaccacgtt
ggagaacgaattgggtcggatggcgatgcgattagtgttcttgcatcctcccatgtttgg
gttgaccattgctttcttgctcgttgcgccgatggcctcgttgatgtcattcacgcctcc
actgcagttaccatctccaacaattatttcactcaacacgacaaagttatgttgcttgga
cacagagacagctacacggcagaccgagttatgaaagtcactgtggtgtttaaccatttc
ggccgagatcttgttcagagaatgcctagggttcgacacggttatgctcacgtagccaac
aactactacgaccaatggctacagtacgccattggagggagcgcaggtccgacgattcta
agtgagggcaactatttcgtagcttcagatgatgttgcaccccaaaacaaagaggtgacg
aagagggagattaataatgggggttggaaggcatggaaatggaggtctactaaggatgtt
ttcttgaatggggcttattttgtcccatctggatatgggatttgttctccctcgtacgcc
acatcgcagctgtttgttgctgctcaggggtctttggttccttccttgacctatcatgct
ggccccttgcaatgtgttgttggtgaaaaatgttga
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