KEGG   Jejubacter calystegiae: FEM41_02865
Entry
FEM41_02865       CDS       T05975                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
izh  Jejubacter calystegiae
Pathway
izh02020  Two-component system
izh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:izh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FEM41_02865 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FEM41_02865 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:izh03021]
    FEM41_02865 (rpoN)
Transcription machinery [BR:izh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FEM41_02865 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: QCT18659
UniProt: A0A4P8YDT0
LinkDB
Position
621992..623425
AA seq 477 aa
MKQGLQLKLSQQLAMTPQLQQAIRLLQLSTLELQQELNQALESNPLLEQSDPLDEVATTE
SSDSETLDSRDALEQDSMPEELPLDASWDEIYTAGTPSGTGTDYVDDELPIYQGETTQSL
QDYLMWQVELTPFSDTDIAIATSIVDAVDDTGYLTITVQDILDGMGDEEVTQEEVEAVLK
RIQRFDPVGVAARDLRECLLIQLSQFAPETPRLNEAHQIVNDHLDLLANHDFRSLMRVTR
LKEEVLKESVGLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHQGRWVVELNGDSIPRLKIN
QQYAAMGTSARNDSDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEHGEE
HMKPMVLADIAQAVDMHESTISRVTTQKYLQSPGGIFELKYFFSSHVSTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTAMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaattaaagctgagccaacagcttgccatgacgccccagctgcaa
caggccatccgcctgctgcagctctccacgctggaactccagcaggagcttaaccaggcg
ctggaaagcaatcccctgcttgaacagagcgacccccttgacgaagtcgcgaccaccgaa
agcagcgacagcgaaacgctcgatagccgggatgcgctggaacaagactccatgcccgaa
gagctgccgcttgatgccagctgggacgagatctataccgcaggcactccctccggtacc
ggcactgactatgtcgacgacgaactgcccatctaccagggcgaaaccacccagtccctt
caggactacctgatgtggcaggttgagctaactcctttctccgacaccgatatcgccatc
gcgacctctattgtcgacgccgtcgacgacaccggctacctcaccatcacggtccaggac
attctggacggcatgggcgatgaagaggtgacccaggaagaggtagaggcggtactcaag
cgcattcagcgcttcgatccggttggcgtggctgcccgcgatttgcgggaatgtctgttg
atccagctttctcagttcgcgcccgaaaccccgcgcctgaatgaggcgcatcagatcgtc
aacgatcatctcgatctgctggccaatcatgattttcgctcgctgatgcgcgttacgcgc
cttaaagaggaggtgctgaaagaatccgtcgggctgattcagtccctcgatccacgccca
ggccagtcgattcagaccagcgagccggaatacgttatccctgacgtgctggtccgtaag
caccagggacgctgggttgtggaacttaacggcgacagtattccgcgcctgaagattaat
cagcagtatgcggccatggggaccagcgcccgtaacgacagcgacagccagtttatccgc
agtaatctgcaggaagcgaagtggctgattaagagtctggagagccgtaacgacaccctg
ctacgcgtcagccgctgtattgtggaacagcagcaggcctttttcgaacatggtgaagag
catatgaaacccatggtgctggccgatatcgcccaggccgttgatatgcacgaatccacc
atctcacgcgtcaccactcaaaaatacctccagagtccaggaggtatttttgagctcaag
tatttcttctccagccacgtgagcaccgaaggcggcggcgaagcctcctctacggctatc
cgggcgttggtgaagaaattaatcgctgcggagaatcccgccaagccactgagcgacagt
aagctcaccgccatgctctccgaccaggggattatggtggcgcgccgaaccgttgcgaag
taccgagagtctttatcgattcctccgtctaaccagcgtaaacaactggtctga

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