Jejubacter calystegiae: FEM41_02865
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Entry
FEM41_02865 CDS
T05975
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
izh
Jejubacter calystegiae
Pathway
izh02020
Two-component system
izh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FEM41_02865 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FEM41_02865 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
izh03021
]
FEM41_02865 (rpoN)
Transcription machinery [BR:
izh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FEM41_02865 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QCT18659
UniProt:
A0A4P8YDT0
LinkDB
All DBs
Position
621992..623425
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AA seq
477 aa
AA seq
DB search
MKQGLQLKLSQQLAMTPQLQQAIRLLQLSTLELQQELNQALESNPLLEQSDPLDEVATTE
SSDSETLDSRDALEQDSMPEELPLDASWDEIYTAGTPSGTGTDYVDDELPIYQGETTQSL
QDYLMWQVELTPFSDTDIAIATSIVDAVDDTGYLTITVQDILDGMGDEEVTQEEVEAVLK
RIQRFDPVGVAARDLRECLLIQLSQFAPETPRLNEAHQIVNDHLDLLANHDFRSLMRVTR
LKEEVLKESVGLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHQGRWVVELNGDSIPRLKIN
QQYAAMGTSARNDSDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEHGEE
HMKPMVLADIAQAVDMHESTISRVTTQKYLQSPGGIFELKYFFSSHVSTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTAMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaagctgagccaacagcttgccatgacgccccagctgcaa
caggccatccgcctgctgcagctctccacgctggaactccagcaggagcttaaccaggcg
ctggaaagcaatcccctgcttgaacagagcgacccccttgacgaagtcgcgaccaccgaa
agcagcgacagcgaaacgctcgatagccgggatgcgctggaacaagactccatgcccgaa
gagctgccgcttgatgccagctgggacgagatctataccgcaggcactccctccggtacc
ggcactgactatgtcgacgacgaactgcccatctaccagggcgaaaccacccagtccctt
caggactacctgatgtggcaggttgagctaactcctttctccgacaccgatatcgccatc
gcgacctctattgtcgacgccgtcgacgacaccggctacctcaccatcacggtccaggac
attctggacggcatgggcgatgaagaggtgacccaggaagaggtagaggcggtactcaag
cgcattcagcgcttcgatccggttggcgtggctgcccgcgatttgcgggaatgtctgttg
atccagctttctcagttcgcgcccgaaaccccgcgcctgaatgaggcgcatcagatcgtc
aacgatcatctcgatctgctggccaatcatgattttcgctcgctgatgcgcgttacgcgc
cttaaagaggaggtgctgaaagaatccgtcgggctgattcagtccctcgatccacgccca
ggccagtcgattcagaccagcgagccggaatacgttatccctgacgtgctggtccgtaag
caccagggacgctgggttgtggaacttaacggcgacagtattccgcgcctgaagattaat
cagcagtatgcggccatggggaccagcgcccgtaacgacagcgacagccagtttatccgc
agtaatctgcaggaagcgaagtggctgattaagagtctggagagccgtaacgacaccctg
ctacgcgtcagccgctgtattgtggaacagcagcaggcctttttcgaacatggtgaagag
catatgaaacccatggtgctggccgatatcgcccaggccgttgatatgcacgaatccacc
atctcacgcgtcaccactcaaaaatacctccagagtccaggaggtatttttgagctcaag
tatttcttctccagccacgtgagcaccgaaggcggcggcgaagcctcctctacggctatc
cgggcgttggtgaagaaattaatcgctgcggagaatcccgccaagccactgagcgacagt
aagctcaccgccatgctctccgaccaggggattatggtggcgcgccgaaccgttgcgaag
taccgagagtctttatcgattcctccgtctaaccagcgtaaacaactggtctga
DBGET
integrated database retrieval system