Jejubacter calystegiae: FEM41_10305
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Entry
FEM41_10305 CDS
T05975
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03030
DNA replication
izh03430
Mismatch repair
izh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEM41_10305 (dnaQ)
03430 Mismatch repair
FEM41_10305 (dnaQ)
03440 Homologous recombination
FEM41_10305 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
izh03032
]
FEM41_10305 (dnaQ)
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_10305 (dnaQ)
Enzymes [BR:
izh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEM41_10305 (dnaQ)
DNA replication proteins [BR:
izh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FEM41_10305 (dnaQ)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FEM41_10305 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Vmethyltransf_C
DUF3856
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
QCT20015
UniProt:
A0A4P8YH49
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All DBs
Position
2240226..2240972
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AA seq
248 aa
AA seq
DB search
MSAMSTNTGIARQIVLDTETTGMNQIGAHYEGHCIIEIGAVEVINRRLTGNNFHVYIKPD
RLVDPEAFMVHGIADEFLMSQPTFAEVADDFIDYIRGAELIIHNASFDIGFMDYEFGKLK
RGIPKTNTFCEVTDSLALARKMFPGKRNSLDALCSRYEIDNTKRTLHGALLDSQILADVW
LAMTGGQTSMTFAMEGESQQEQGSETVQRVVRRAQALRVIAASDEELMNHESRLDLVEKK
GGSCLWRA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgagcacgaataccggtatagcaagacagatcgtactcgataccgaaacc
acgggtatgaaccagatcggtgcccattatgaggggcactgcattattgagatcggggcc
gttgaggttatcaaccgccgcctgacgggcaataatttccacgtttacattaagccggac
cggctggtggatcctgaagcctttatggttcacggtatcgctgatgagtttctgatgagc
cagccgacttttgccgaggtggcggacgactttatcgactatattcgtggcgccgagctt
atcatccataacgcatcgtttgatatcggctttatggactacgagtttgggaagctcaag
cgcggaatccctaaaaccaataccttctgcgaggtgaccgacagcctggcgctggcgcgt
aagatgtttcccggcaagcgtaatagcctggatgcgctctgttcccgctacgaaatagat
aacaccaaacgtaccctgcacggggcattgctcgactcccaaattctggccgatgtctgg
ctggcgatgaccggtgggcaaacgtcaatgaccttcgctatggaaggggagtctcaacag
gaacaggggagcgaaactgttcagcgtgttgtacgacgcgctcaggctctacgagtgatt
gccgccagcgatgaggagctgatgaaccacgaatcgcgtctcgatctggtggaaaagaag
ggcggaagctgcctctggcgcgcctga
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