KEGG   Janthinobacterium sp. 17J80-10: EKL02_05730
Entry
EKL02_05730       CDS       T05896                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
jaj  Janthinobacterium sp. 17J80-10
Pathway
jaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EKL02_05730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jaj03400]
    EKL02_05730
DNA repair and recombination proteins [BR:jaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EKL02_05730
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EKL02_05730
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind nSTAND1 DnaJ_CXXCXGXG AAA_29 AAA_16 AAA_25 RsgA_GTPase AAA_21
Other DBs
NCBI-ProteinID: QAU33724
UniProt: A0A410UQY2
LinkDB
Position
1258595..1261195
AA seq 866 aa
MKKNEDKHTLHAPGQTRAGFVHVRGAREHNLKNVDVDIPRDALVVFTGISGSGKSSLAFG
TLYAEAQRRYLESVSPYARRLFHQMPVPEVDAVDGLPPAVALQQQRGTPTTRSSVGSVTT
LSNSLRMLYSRAGDYPPRQPLLYADAFSPNTADGACTQCHGLGRIYEVTEKSMVPDDTLT
IRERAVAAWPPAWHGQNLRDILTTLGHDIDRPWRELPKKDRDWILFTDEQPVVPVYAGFT
RQEVKQALRQKMEPSYQGTFTGARRYVLHTFANTESAAMKKRVAQYMVSSECPACGGKRL
RREALSVKFAGYDIADISRLPLMRLAELIKPYEEGRVRGWEKLAARHPEKAIVTQRIAQD
VAARLAVLLELGLGYLTLERSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPA
DSEALLHALGRLKASGNSLFVVEHSLDVMRHADWIVDVGPGAGKDGGAILYSGPPQGLRD
TTASHTRRYLFVEEKSATRTPRQAKDWLRLEGVSRNNLHRLDVAFPLGALTSVTGVSGSG
KSSLVSQVLVELVGAALGQALPVEAEDEEPFDRLEKADPGVTEGRIAGGMEAIRRLVRVD
QKPIGRTPRSNLATYTGLFDYVRKLFAATKTSRARKYDAGRFSFNVAKGRCEHCEGEGFV
MVELLFLPSVYAPCPTCHGARYNARTLEIAYRDKNIADVLSMTVDDAWAFFADEPAIHRS
LSMLREVGLGYLRLGQPATELSGGEAQRIKLATELQRATRGNTLYILDEPTTGLHAADVE
KLIVQLDGLAEAGNTVVVVEHDMRVVIASDWVIDIGPGAGEEGGKVVVAGPPANVAVNNK
SITAPYLARFMALNLDADKDGLRQAG
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgaaaaaaaacgaagacaagcatactttgcatgctcccggtcaaacccgtgccggcttt
gtgcatgtccgtggcgcgcgcgaacataacctcaagaatgtcgatgtcgatattccccgc
gatgcccttgtggtatttaccggaatttccggctccgggaagtcgtcgcttgccttcggc
acgctgtatgccgaagcccagcgccgctatctggaatcggtttcgccctatgcgcggcgc
ctgttccatcagatgcccgtgccggaagtcgatgcggtcgatggcttgccgccggctgtg
gcattgcagcagcagcgcggcaccccgacgacgcgctcctctgtcggcagcgtcacgacg
ctgtcgaattccctgcgcatgctgtactcgcgcgccggcgactatccgcccaggcagccg
ctgttatacgcagatgccttctctcccaacaccgccgatggcgcatgcacgcaatgccat
ggcctgggccgcatctatgaggtgaccgagaagtcgatggtgcctgacgatacgctgacg
attcgcgagcgtgccgtggcggcctggccgcccgcctggcatggccagaacctgcgcgat
atcctgaccacgctgggccatgacatcgatcgcccatggcgggagttgccaaagaaagac
cgcgactggatccttttcaccgatgaacagcccgtcgtgcccgtctatgcgggcttcacc
cgccaggaagtcaagcaggcgctcaggcaaaaaatggagcccagctatcaaggcaccttc
accggcgcgcgccggtatgtcttgcatacgtttgccaataccgaaagcgcggcgatgaag
aagcgggtggcacagtacatggtcagcagcgaatgtccggcgtgcgggggcaagcgcctg
cggcgcgaagccttgtcagtgaagtttgcgggttacgatatcgccgatatctccaggttg
ccgttaatgcgccttgccgaattgatcaagccgtatgaagagggcagggtgcgcggctgg
gaaaagcttgcagcacgtcatccggaaaaagcgatcgtgacccaacgcatcgcgcaggac
gtggcagcccgccttgccgttttgcttgagctgggattggggtacctgacgctggaacgc
agcacgcccacgctctctccgggcgagttgcagcggctacgcctggcaacccaggtgcgc
tcgaacctgttcggcgtggtgtatgtgctggacgagccttccgccggcctgcacccggcc
gatagcgaggcgctgctgcatgcgctcggccgcttgaaagcttccggcaattcgttgttc
gtggtggagcactcgctcgatgtcatgcggcatgcggactggatcgtcgatgtcggccct
ggcgccggcaaggatggcggtgcgatactctatagcggcccgccgcaaggcttgcgcgac
acaacggcatcgcacacgcgccgttacttgttcgtggaggaaaaatccgccacgcgcacg
ccgcgccaggcaaaagactggctgcgtctggaaggggtgtcgcgcaataacctgcatcgg
ctggacgtggcctttccgctcggcgcgctcaccagcgtgacaggcgtctccggttcggga
aaatccagcctggtcagccaggtgttggtagagctggtgggggcggcccttgggcaggca
ttgccggtggaagccgaggatgaggagccgttcgatcgactggagaaagccgatcccggc
gttaccgaaggacgcatcgccggcgggatggaagcgatccggcggctggtgcgggtcgat
caaaagccgatcggccgcacaccgcgttccaacctggccacgtataccgggcttttcgat
tacgtgcgcaagctttttgccgcgacaaaaacatcgcgcgcgcgcaaatacgatgccggg
cgattctcgttcaatgtcgccaagggacgctgtgagcactgcgaaggcgaaggctttgtc
atggtcgagcttttgttcctgccgagcgtctatgccccttgcccaacctgccacggggcg
cgttataacgccaggaccctggagattgcctaccgggacaagaacatcgccgatgtactg
agcatgacggtggatgatgcctgggccttctttgccgacgagccggcaatccatcgctcg
ctttcaatgttgcgggaagtgggcctggggtatctgcgtctcggccagccggcaaccgag
ttgtccggcggcgaagcccagcgcatcaagctggcaaccgaactgcagcgcgcaacgcgc
ggcaataccctttatattctggacgagccgaccaccggtttgcatgccgccgatgtggaa
aagctcatcgttcagctcgatgggctggccgaggccggcaataccgtggtcgtggtggag
cacgacatgcgcgtggtcatcgccagcgactgggtcattgatatcggcccaggtgccggc
gaagaaggcggcaaggtggttgtggccggaccaccggcgaacgtggcagtgaacaataaa
agcatcacggcgccttatctcgcgcgctttatggcgttgaatctggacgcggacaaggac
ggcctgcggcaggcaggatag

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