Janthinobacterium sp. 17J80-10: EKL02_05730
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Entry
EKL02_05730 CDS
T05896
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKL02_05730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_05730
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKL02_05730
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EKL02_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_25
RsgA_GTPase
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QAU33724
UniProt:
A0A410UQY2
LinkDB
All DBs
Position
1258595..1261195
Genome browser
AA seq
866 aa
AA seq
DB search
MKKNEDKHTLHAPGQTRAGFVHVRGAREHNLKNVDVDIPRDALVVFTGISGSGKSSLAFG
TLYAEAQRRYLESVSPYARRLFHQMPVPEVDAVDGLPPAVALQQQRGTPTTRSSVGSVTT
LSNSLRMLYSRAGDYPPRQPLLYADAFSPNTADGACTQCHGLGRIYEVTEKSMVPDDTLT
IRERAVAAWPPAWHGQNLRDILTTLGHDIDRPWRELPKKDRDWILFTDEQPVVPVYAGFT
RQEVKQALRQKMEPSYQGTFTGARRYVLHTFANTESAAMKKRVAQYMVSSECPACGGKRL
RREALSVKFAGYDIADISRLPLMRLAELIKPYEEGRVRGWEKLAARHPEKAIVTQRIAQD
VAARLAVLLELGLGYLTLERSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPA
DSEALLHALGRLKASGNSLFVVEHSLDVMRHADWIVDVGPGAGKDGGAILYSGPPQGLRD
TTASHTRRYLFVEEKSATRTPRQAKDWLRLEGVSRNNLHRLDVAFPLGALTSVTGVSGSG
KSSLVSQVLVELVGAALGQALPVEAEDEEPFDRLEKADPGVTEGRIAGGMEAIRRLVRVD
QKPIGRTPRSNLATYTGLFDYVRKLFAATKTSRARKYDAGRFSFNVAKGRCEHCEGEGFV
MVELLFLPSVYAPCPTCHGARYNARTLEIAYRDKNIADVLSMTVDDAWAFFADEPAIHRS
LSMLREVGLGYLRLGQPATELSGGEAQRIKLATELQRATRGNTLYILDEPTTGLHAADVE
KLIVQLDGLAEAGNTVVVVEHDMRVVIASDWVIDIGPGAGEEGGKVVVAGPPANVAVNNK
SITAPYLARFMALNLDADKDGLRQAG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacgaagacaagcatactttgcatgctcccggtcaaacccgtgccggcttt
gtgcatgtccgtggcgcgcgcgaacataacctcaagaatgtcgatgtcgatattccccgc
gatgcccttgtggtatttaccggaatttccggctccgggaagtcgtcgcttgccttcggc
acgctgtatgccgaagcccagcgccgctatctggaatcggtttcgccctatgcgcggcgc
ctgttccatcagatgcccgtgccggaagtcgatgcggtcgatggcttgccgccggctgtg
gcattgcagcagcagcgcggcaccccgacgacgcgctcctctgtcggcagcgtcacgacg
ctgtcgaattccctgcgcatgctgtactcgcgcgccggcgactatccgcccaggcagccg
ctgttatacgcagatgccttctctcccaacaccgccgatggcgcatgcacgcaatgccat
ggcctgggccgcatctatgaggtgaccgagaagtcgatggtgcctgacgatacgctgacg
attcgcgagcgtgccgtggcggcctggccgcccgcctggcatggccagaacctgcgcgat
atcctgaccacgctgggccatgacatcgatcgcccatggcgggagttgccaaagaaagac
cgcgactggatccttttcaccgatgaacagcccgtcgtgcccgtctatgcgggcttcacc
cgccaggaagtcaagcaggcgctcaggcaaaaaatggagcccagctatcaaggcaccttc
accggcgcgcgccggtatgtcttgcatacgtttgccaataccgaaagcgcggcgatgaag
aagcgggtggcacagtacatggtcagcagcgaatgtccggcgtgcgggggcaagcgcctg
cggcgcgaagccttgtcagtgaagtttgcgggttacgatatcgccgatatctccaggttg
ccgttaatgcgccttgccgaattgatcaagccgtatgaagagggcagggtgcgcggctgg
gaaaagcttgcagcacgtcatccggaaaaagcgatcgtgacccaacgcatcgcgcaggac
gtggcagcccgccttgccgttttgcttgagctgggattggggtacctgacgctggaacgc
agcacgcccacgctctctccgggcgagttgcagcggctacgcctggcaacccaggtgcgc
tcgaacctgttcggcgtggtgtatgtgctggacgagccttccgccggcctgcacccggcc
gatagcgaggcgctgctgcatgcgctcggccgcttgaaagcttccggcaattcgttgttc
gtggtggagcactcgctcgatgtcatgcggcatgcggactggatcgtcgatgtcggccct
ggcgccggcaaggatggcggtgcgatactctatagcggcccgccgcaaggcttgcgcgac
acaacggcatcgcacacgcgccgttacttgttcgtggaggaaaaatccgccacgcgcacg
ccgcgccaggcaaaagactggctgcgtctggaaggggtgtcgcgcaataacctgcatcgg
ctggacgtggcctttccgctcggcgcgctcaccagcgtgacaggcgtctccggttcggga
aaatccagcctggtcagccaggtgttggtagagctggtgggggcggcccttgggcaggca
ttgccggtggaagccgaggatgaggagccgttcgatcgactggagaaagccgatcccggc
gttaccgaaggacgcatcgccggcgggatggaagcgatccggcggctggtgcgggtcgat
caaaagccgatcggccgcacaccgcgttccaacctggccacgtataccgggcttttcgat
tacgtgcgcaagctttttgccgcgacaaaaacatcgcgcgcgcgcaaatacgatgccggg
cgattctcgttcaatgtcgccaagggacgctgtgagcactgcgaaggcgaaggctttgtc
atggtcgagcttttgttcctgccgagcgtctatgccccttgcccaacctgccacggggcg
cgttataacgccaggaccctggagattgcctaccgggacaagaacatcgccgatgtactg
agcatgacggtggatgatgcctgggccttctttgccgacgagccggcaatccatcgctcg
ctttcaatgttgcgggaagtgggcctggggtatctgcgtctcggccagccggcaaccgag
ttgtccggcggcgaagcccagcgcatcaagctggcaaccgaactgcagcgcgcaacgcgc
ggcaataccctttatattctggacgagccgaccaccggtttgcatgccgccgatgtggaa
aagctcatcgttcagctcgatgggctggccgaggccggcaataccgtggtcgtggtggag
cacgacatgcgcgtggtcatcgccagcgactgggtcattgatatcggcccaggtgccggc
gaagaaggcggcaaggtggttgtggccggaccaccggcgaacgtggcagtgaacaataaa
agcatcacggcgccttatctcgcgcgctttatggcgttgaatctggacgcggacaaggac
ggcctgcggcaggcaggatag
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