Janthinobacterium tructae: FJQ89_20335
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Entry
FJQ89_20335 CDS
T06359
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FJQ89_20335 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jas03021
]
FJQ89_20335 (rpoA)
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_20335 (rpoA)
Enzymes [BR:
jas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FJQ89_20335 (rpoA)
Transcription machinery [BR:
jas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FJQ89_20335 (rpoA)
DNA repair and recombination proteins [BR:
jas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FJQ89_20335 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF7219
Motif
Other DBs
NCBI-ProteinID:
QDG72502
UniProt:
A0A4Y6RHL3
LinkDB
All DBs
Position
4632980..4633957
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAILASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YFVESARVEQRTDLDKLIINIETNGVISPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgttgaagccacgtattatcgatgttgaagctctcggtgcaggtcac
gccaaagtcgtgatggaaccgttcgagcgcggctatggccacacattgggtaacgcgttg
cgccgcgttctgctgtcgtcgatggtaggctacgcgccgaccgaagtgacgatcgctggc
gtcgtccacgaatattcctccctcgatggcgtgcaagaagacgtcgtcgatctgttgctg
aacttgaagggtgtggttttcaaagtccacaaccgcgattcggtaaccctgaccctgaaa
aaagaaggcgaaggcgcgatcctggcctccgacatcgacctgccgcatgacgtcgaactg
atcaaccctgaccacgtgatcgcccacctgaccgctggtggcaagctggacatgcagatc
aaggttgaaaaaggccgcggctacgtgcctggtaacgtgcgtcgcctgtcggaagacacg
aacaagaccatcggccgcatcatcctggacgcgtcgttctcgccagtgcgccgtgtatcg
tacttcgttgaatcggcgcgcgttgaacaacgtaccgacctggacaagctgatcatcaac
atcgaaaccaacggcgtgatctcgccggaagaagcgatccgccagtcggcccgcgtcctg
gtggaccagttgaatgtgttcgctgccctggaaggcacggaagctgccgccgaagcgcca
tcgcgcgctccgctggtcgatcctatcctgttgcgtccagtcgatgacctggagttgacc
gtgcgttcggcgaactgcctgaaagcggaaaacatctactacatcggcgacctgatccaa
cgttcggaaaacgaactgctgaaaacgccaaatctgggccgcaagtccctgaacgaaatc
aaggaagtgctggcatcgcgcggcttgaccttgggcatgaagctggaaaactggccgcct
gcaggcctggaaaagtaa
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