Jatropha curcas (Barbados nut): 105645943
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Entry
105645943 CDS
T03922
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5 isoform X2
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
jcu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105645943
09124 Replication and repair
03420 Nucleotide excision repair
105645943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105645943
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105645943
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105645943
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105645943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
ASFV_p27
Motif
Other DBs
NCBI-GeneID:
105645943
NCBI-ProteinID:
XP_012087082
UniProt:
A0A067K1B6
LinkDB
All DBs
Position
Unknown
AA seq
70 aa
AA seq
DB search
MVNATKGLFVSCDIPMAQFIINMNASLPASQKFIIHILDNTRLFVQPHAAEMIRSAISEF
RDQNSYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgccacaaaaggattgtttgtgtcctgtgacattcccatggcgcaattcatt
atcaatatgaatgcttctctgcctgcatcacagaagtttattattcacattttggataac
actcgtctatttgtgcaaccccatgcggctgaaatgatacgaagtgccatttctgagttt
agagaccaaaattcctatgagaaacctgcttaa
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