Jatropha curcas (Barbados nut): 105649511
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Entry
105649511 CDS
T03922
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105649511
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105649511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
105649511
NCBI-ProteinID:
XP_012091565
UniProt:
A0A067JDU6
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS
GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ
MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR
AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES
DSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELIV
GCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQM
AMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQEK
KSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRLA
EMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEANN
NGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDFDLP
ISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttggaaaatttgcttctggaggcagcaggaagaactggatcatctggaaga
aacaggaatgcacatccaccatctaggaggcgacgtgagggttcatattctgatggtgga
agtgactctagagatgaagattcagatgatgaccgcggctatgccagcaggaagccatct
ggatctcaagttcctttgaagaagagattggaccctgctgaaagagatgatgatcagggt
agccaagaagaaggtggttatgatgatggggcctctgaccgtgagggtgacagcagtgat
gaatcagatgttggtgatgatctttacaaggatgaggatgatcggaggaagcttgctcaa
atgagtgaacttgaaagggagatgatattatcagagcgggcagacaagaaaggtgataag
aatttaactgagaggattagatcaaaacgggacagtgagagggcaacccgatccagaaaa
gagactccacctctgccatcatctcgcggagttcgcacatcagctagatcggcagacagg
gcagctgccaaagatgatgcattgaacgaactcagagctaagcgtttaaagcagcaggac
ccagaggctcaccgtaagttgagggatgtctctagaggaacttctggcagtcggggtgtt
tcacctgtcaggagaaaacgtttcacttcggcaagcctgagtagctctagcagtgagagt
gacagtaggtctcatagtgaagatgaagcgtcaacaggtgacggtggaatggcagatagt
gatgaggacagagagcctggatccgaaggtctgacatatgatgatatacgggaagtcact
atccggaggtcaaaacttgctaaatggcttatggagccatggtttgaagagttgattgta
ggttgctttgtgagggttgggattggaaggtcaaaatctggtccaatctacaggctctgc
ttagtccgtaatgttgatgctgcagaccctgaccgcccatacaaactggagaataaaact
acatacaaatatctgaatgttatttggggcaatgaaagctctgcagcaaggtggcagatg
gcgatggtttccgactctgctccaactgaggatgagtataaacagtgggtcagggaggtg
gagcgtagtggtggccggatgccaaccaaacaggatattctggaaaagaaggaggcaata
aaaaagtcaaatacatttgtatactcagcggccactgtgaagcagatgttgcaggagaaa
aaatctgcctcaacaaggccattaaatgttgctgctgagaaggaccggttgaggagagag
ttggaagttgcacaaatgaaacaagatgatgcagaggtagagaggattagggcaagaatt
caggaactggaggcatctcggcaagctcaggaaaaagatgcaaaggctattagactggca
gagatgaatagaaagaacagggctgagaattttagaaatgcctcagaattgaaacctgta
aacacaagtctgaaagcaggggaggctgggtatgatcctttttcaaggagatggactagg
tctaggaattattatgtgtcaaagcctggtggagcagatgtggctgcagaagcaaataat
aatggcacagcagctgttgcacatagtaatggggcagcaacagggactttggctgaggct
ggcatggctgctacagcggcagccttggaggcagcagctgatgcagggaagttggttgat
actgcagctcctgtggatcaagggactgagtcaaatacacttcatgattttgatcttcca
atctcattgactgcacttgagaagtttggcggagcaaagggtgctaaggcagggttcatg
gcaaggaaacaacagatagaagcaactgtcggatgccgggtccctgagaatgacgggagg
agacatgctctgactttgactgttagcgactacaagagaagaagaggactcctctga
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