Juglans regia (English walnut): 108979226
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Entry
108979226 CDS
T05245
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108979226
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108979226
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108979226
NCBI-ProteinID:
XP_035544563
UniProt:
A0A6P9EKH6
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Position
3:complement(8979952..8982346)
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AA seq
396 aa
AA seq
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MASDLLVIIILLSCFLAHLASTSEVADYTPQPLSSISNSPKLTTNILNVIDACWRTKSNW
AANRRSLADCVVGFGKDAIGGKFGAIYVVTTSDDDPVNPKPGTLRYGVIQEKPLWIIFAK
DMVIKLKNELIMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISIHDCKPGKDGLVR
DSPTHVGRRRGSDGDAIAIFASSNVWIDHCFLARCTDGLIDVVHASTAITISNNYFSQHD
KVMLLGHNDKFTADKVMKVTIVFNRFGAGCVERMPRVRFGYAHVANNKYEEWLMYAVGGS
ANPTIFSEGNYFKASNIPFAKQVTKREARGAWKDWKWRSSKDVFVNGAYFVQSGWGSCSP
YYSRTQSFSVAHGLMVPALTSSAGPLQCVAAKACKF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgatctcctagtaataatcatattgctttcatgttttctagcacacttggct
tcaacttctgaagtggccgattacaccccacaacccttgagctcaatctccaacagtcct
aagctgactacaaacattttgaacgtaatagacgcatgctggcgcaccaaatcgaattgg
gcggccaaccggcgttctctggctgattgcgtggtaggtttcggcaaagatgcaatagga
ggaaagtttggggcaatatacgtggtcaccacctctgatgatgaccccgtgaaccctaaa
ccaggcacacttcgatatggtgtcatccaagaaaagccactttggatcatttttgccaag
gacatggtgattaagctcaagaacgagcttattatgaatagtttcaagaccatcgacggc
agaggtgctaaagtggagattgcatacggcccatgcatcacagtgcaaggtgttagccac
gtcattatacatgggattagtattcatgactgtaaacccgggaaagatggccttgttagg
gacagtccgacacatgttggacgtcgtcgaggctccgacggagatgccattgccatcttt
gcgtcttcgaatgtttggatcgatcattgctttctcgcacgttgcaccgacggcctcatt
gatgtagtccatgcatcgactgcaatcaccatctctaacaactacttctcccagcatgat
aaagtgatgctgctgggacacaatgataaatttactgcagataaagtcatgaaagtcaca
atagttttcaaccgttttggtgccgggtgtgttgaaaggatgcccagggtcaggtttgga
tatgcccatgtcgccaataataaatatgaagaatggcttatgtatgctgttggcggcagt
gctaatccaaccatcttcagcgaaggaaactacttcaaagcttccaatattccctttgcc
aaacaggtcaccaaaagagaggcaagaggtgcctggaaggattggaaatggaggtcttct
aaggatgtatttgtcaatggtgcttattttgttcaatccgggtggggaagttgctctcca
tattactctcgaactcaatcgttttcagttgctcatggattgatggtccctgctctgact
tccagtgctggtcctctgcaatgtgttgctgctaaagcttgcaaattttag
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